RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 MYCLP12524 364 aaPredicted RBP8.34□□□□□ -1.07
COL6A3-208ENST00000468792 UCHL3P15374 230 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 H2AFXP16104 143 aaPredicted RBP8.34□□□□□ -1.07
COL6A3-208ENST00000468792 PON1P27169 355 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 NMT1P30419 496 aaKnown RBP8.34□□□□□ -1.07
COL6A3-208ENST00000468792 KIF11P52732 1056 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 DGKZQ13574 1117 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 HSP90AA2PQ14568 343 aaPredicted RBP8.34□□□□□ -1.07
COL6A3-208ENST00000468792 STXBP2Q15833 593 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 CCDC122Q5T0U0 273 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 ABHD15Q6UXT9 468 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 INTS8Q75QN2 995 aaKnown RBP8.34□□□□□ -1.07
COL6A3-208ENST00000468792 SRGAP1Q7Z6B7 1085 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 KIAA1328Q86T90 577 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 FAM186BQ8IYM0 893 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 ANKRD13AQ8IZ07 590 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 GPR161Q8N6U8 529 aaKnown RBP8.34□□□□□ -1.07
COL6A3-208ENST00000468792 MNS1Q8NEH6 495 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 MCPH1Q8NEM0 835 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 TRIM58Q8NG06 486 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 SMCR8Q8TEV9 937 aaPredicted RBP8.34□□□□□ -1.07
COL6A3-208ENST00000468792 UBE2Q2Q8WVN8 375 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 JAKMIP2Q96AA8 810 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 PDLIM7Q9NR12 457 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 HOMER2Q9NSB8 354 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 EXOC7Q9UPT5 735 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 FRMD4BQ9Y2L6 1034 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 SAMM50Q9Y512 469 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 PCDHA13Q9Y5I0 950 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 PTPRFP10586 1907 aa8.34□□□□□ -1.07
COL6A3-208ENST00000468792 POLR2AP24928 1970 aaKnown RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 IGKV6D-21A0A0A0MT36 114 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 TESPA1A2RU30 521 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 SFI1A8K8P3 1242 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 POTEB2H3BUK9 544 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 ZNF263O14978 683 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 ATP8B1O43520 1251 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 AKR1B10O60218 316 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 TLR2O60603 784 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 DGAT1O75907 488 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 DDNO94850 711 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 CCDC172P0C7W6 258 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 NF2P35240 595 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 EIF4A3P38919 411 aaKnown RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 SMTNP53814 917 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 JAM2P57087 298 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 ITIH3Q06033 890 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 KCNA1Q09470 495 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 PPIL2Q13356 520 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 SLC18A3Q16572 532 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 PRAMEF18Q5VWM3 479 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 DPY19L2Q6NUT2 758 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 MIS18BP1Q6P0N0 1132 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 KCNV1Q6PIU1 500 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 FASTKD5Q7L8L6 764 aaKnown RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 TRAPPC11Q7Z392 1133 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 IRF2BP2Q7Z5L9 587 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 ZNF467Q7Z7K2 595 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 SLC35F6Q8N357 371 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 CCDC155Q8N6L0 562 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 GTF3C2Q8WUA4 911 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 MPHOSPH6Q99547 160 aaKnown RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 LSM14BQ9BX40 385 aaKnown RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 CARD6Q9BX69 1037 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 IFIH1Q9BYX4 1025 aaKnown RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 IRX2Q9BZI1 471 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 FHDC1Q9C0D6 1143 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 DEF6Q9H4E7 631 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 JPH1Q9HDC5 661 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 SLC9A2Q9UBY0 812 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 TSKSQ9UJT2 592 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 INTUQ9ULD6 942 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 JRKLQ9Y4A0 524 aa8.33□□□□□ -1.08
COL6A3-208ENST00000468792 FARP1Q9Y4F1 1045 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 MAFBQ9Y5Q3 323 aaPredicted RBP8.33□□□□□ -1.08
COL6A3-208ENST00000468792 IGSF9BQ9UPX0 1349 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 MYH11P35749 1972 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 KIAA0391O15091 583 aaKnown RBP8.32□□□□□ -1.08
COL6A3-208ENST00000468792 TACC1O75410 805 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 FERP16591 822 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 GTF2H1P32780 548 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 MAGEA1P43355 309 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 FMO5P49326 533 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 CASP4P49662 377 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 POLR2FP61218 127 aaKnown RBP8.32□□□□□ -1.08
COL6A3-208ENST00000468792 CETN1Q12798 172 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 BFSP1Q12934 665 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 ERCC6LQ2NKX8 1250 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 ZC2HC1CQ53FD0 456 aaPredicted RBP8.32□□□□□ -1.08
COL6A3-208ENST00000468792 XKR3Q5GH77 459 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 ANO5Q75V66 913 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 ZNF572Q7Z3I7 529 aaPredicted RBP8.32□□□□□ -1.08
COL6A3-208ENST00000468792 HAUS6Q7Z4H7 955 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 MAP4K3Q8IVH8 894 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 FAM133AQ8N9E0 248 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 TSC1Q92574 1164 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 GOLGA1Q92805 767 aa8.32□□□□□ -1.08
COL6A3-208ENST00000468792 SECISBP2LQ93073 1101 aaKnown RBP8.32□□□□□ -1.08
COL6A3-208ENST00000468792 CALR3Q96L12 384 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms