RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 CALM2P0DP24 149 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 CALM3P0DP25 149 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 MCM5P33992 734 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 ID4P47928 161 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 CLCN3P51790 818 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 MIS18BP1Q6P0N0 1132 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 ZNF598Q86UK7 904 aaKnown RBP21.22■□□□□ 0.99
LINC00888-201ENST00000468380 ABI1Q8IZP0 508 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 RNF169Q8NCN4 708 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 EXOC6Q8TAG9 804 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 AUTS2Q8WXX7 1259 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 BBXQ8WY36 941 aaPredicted RBP21.22■□□□□ 0.99
LINC00888-201ENST00000468380 ZNF668Q96K58 619 aaPredicted RBP21.22■□□□□ 0.99
LINC00888-201ENST00000468380 MAFBQ9Y5Q3 323 aaPredicted RBP21.22■□□□□ 0.99
LINC00888-201ENST00000468380 SLC12A7Q9Y666 1083 aa21.22■□□□□ 0.99
LINC00888-201ENST00000468380 EP300Q09472 2414 aaPredicted RBP21.21■□□□□ 0.99
LINC00888-201ENST00000468380 EPCAMP16422 314 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 ZSCAN20P17040 1043 aaPredicted RBP21.21■□□□□ 0.99
LINC00888-201ENST00000468380 SREBF1P36956 1147 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 METAP2P50579 478 aaKnown RBP eCLIP21.21■□□□□ 0.99
LINC00888-201ENST00000468380 ATAT1Q5SQI0 421 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 MCTP2Q6DN12 878 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 KIAA1841Q6NSI8 718 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 NIPA1Q7RTP0 329 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 TMEM173Q86WV6 379 aaPredicted RBP21.21■□□□□ 0.99
LINC00888-201ENST00000468380 LINC01465Q8N7H1 131 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 TDRD5Q8NAT2 981 aaKnown RBP21.21■□□□□ 0.99
LINC00888-201ENST00000468380 HELQQ8TDG4 1101 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 MFSD1Q9H3U5 465 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 USTQ9Y2C2 406 aa21.21■□□□□ 0.99
LINC00888-201ENST00000468380 CACNA1AO00555 2505 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 EOMESO95936 686 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 EIF4BP23588 611 aaKnown RBP21.2■□□□□ 0.98
LINC00888-201ENST00000468380 ZNF76P36508 570 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 CLK2P49760 499 aaKnown RBP21.2■□□□□ 0.98
LINC00888-201ENST00000468380 NAPAP54920 295 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 BCAR1P56945 870 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 FUT2Q10981 343 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 PLA2G4DQ86XP0 818 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 CKAP2LQ8IYA6 745 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 VPS52Q8N1B4 723 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 PLCD3Q8N3E9 789 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 FLCNQ8NFG4 579 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 SLC22A17Q8WUG5 538 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 DBR1Q9UK59 544 aaKnown RBP21.2■□□□□ 0.98
LINC00888-201ENST00000468380 ZNF292O60281 2723 aa21.2■□□□□ 0.98
LINC00888-201ENST00000468380 IGLV3-22A0A075B6J6 115 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 A0A0U1RQF3 1178 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 SMCO2A6NFE2 343 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 IPO5O00410 1097 aaKnown RBP21.19■□□□□ 0.98
LINC00888-201ENST00000468380 FGFR4P22455 802 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 CA8P35219 290 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 ADCY7P51828 1080 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 EFCAB12Q6NXP0 572 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 MICU3Q86XE3 530 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 LRRC71Q8N4P6 559 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 ZBP1Q9H171 429 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 CYP26B1Q9NR63 512 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 AKT3Q9Y243 479 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 CNTNAP5Q8WYK1 1306 aa21.19■□□□□ 0.98
LINC00888-201ENST00000468380 ADAMTS3O15072 1205 aa21.18■□□□□ 0.98
LINC00888-201ENST00000468380 AOC1P19801 751 aa21.18■□□□□ 0.98
LINC00888-201ENST00000468380 ALDH7A1P49419 539 aaKnown RBP21.18■□□□□ 0.98
LINC00888-201ENST00000468380 TMC5Q6UXY8 1006 aa21.18■□□□□ 0.98
LINC00888-201ENST00000468380 CRYGNQ8WXF5 182 aa21.18■□□□□ 0.98
LINC00888-201ENST00000468380 V9GY48 417 aaPredicted RBP21.18■□□□□ 0.98
LINC00888-201ENST00000468380 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.17■□□□□ 0.98
LINC00888-201ENST00000468380 CSDE1O75534 798 aaKnown RBP21.17■□□□□ 0.98
LINC00888-201ENST00000468380 SGMS1Q86VZ5 419 aa21.17■□□□□ 0.98
LINC00888-201ENST00000468380 CCDC105Q8IYK2 499 aa21.17■□□□□ 0.98
LINC00888-201ENST00000468380 BCL7CQ8WUZ0 217 aaPredicted RBP21.17■□□□□ 0.98
LINC00888-201ENST00000468380 DZANK1Q9NVP4 752 aa21.17■□□□□ 0.98
LINC00888-201ENST00000468380 GABBR1Q9UBS5 961 aa21.17■□□□□ 0.98
LINC00888-201ENST00000468380 IRAK3Q9Y616 596 aa21.17■□□□□ 0.98
LINC00888-201ENST00000468380 MYH9P35579 1960 aaKnown RBP21.16■□□□□ 0.98
LINC00888-201ENST00000468380 SLC27A2O14975 620 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 MAGEB2O15479 319 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 DARSP14868 501 aaKnown RBP21.16■□□□□ 0.98
LINC00888-201ENST00000468380 AP3B2Q13367 1082 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 ANGPT1Q15389 498 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 JAKMIP3Q5VZ66 844 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 ZNF746Q6NUN9 644 aaPredicted RBP21.16■□□□□ 0.98
LINC00888-201ENST00000468380 PPP1R18Q6NYC8 613 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 TEX2Q8IWB9 1127 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 TMEM169Q96HH4 297 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 ZNF577Q9BSK1 485 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 PCDHA10Q9Y5I2 948 aa21.16■□□□□ 0.98
LINC00888-201ENST00000468380 CYP3A4P08684 503 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 CTSAP10619 480 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 GPC3P51654 580 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 TDGQ13569 410 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 GPR149Q86SP6 731 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 DDX53Q86TM3 631 aaKnown RBP21.15■□□□□ 0.98
LINC00888-201ENST00000468380 DTWD2Q8NBA8 298 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 IGSF21Q96ID5 467 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 MAP7D2Q96T17 732 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 VN1R3Q9BXE9 311 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 LSG1Q9H089 658 aaKnown RBP21.15■□□□□ 0.98
LINC00888-201ENST00000468380 BARHL2Q9NY43 387 aa21.15■□□□□ 0.98
LINC00888-201ENST00000468380 DMXL1Q9Y485 3027 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms