RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 DARSP14868 501 aaKnown RBP21.4■■□□□ 1.02
COL7A1-207ENST00000467985 ZSCAN20P17040 1043 aaPredicted RBP21.4■■□□□ 1.02
COL7A1-207ENST00000467985 DSC3Q14574 896 aa21.4■■□□□ 1.02
COL7A1-207ENST00000467985 EARS2Q5JPH6 523 aaKnown RBP21.4■■□□□ 1.02
COL7A1-207ENST00000467985 ANO5Q75V66 913 aa21.4■■□□□ 1.02
COL7A1-207ENST00000467985 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
COL7A1-207ENST00000467985 DIS3L2Q8IYB7 885 aaKnown RBP21.4■■□□□ 1.02
COL7A1-207ENST00000467985 CEP89Q96ST8 783 aa21.4■■□□□ 1.02
COL7A1-207ENST00000467985 ATP6V0A4Q9HBG4 840 aa21.4■■□□□ 1.02
COL7A1-207ENST00000467985 EPHA7Q15375 998 aa21.39■■□□□ 1.01
COL7A1-207ENST00000467985 PAN2Q504Q3 1202 aaKnown RBP21.39■■□□□ 1.01
COL7A1-207ENST00000467985 ZSCAN31Q96LW9 406 aaPredicted RBP21.39■■□□□ 1.01
COL7A1-207ENST00000467985 LLPHQ9BRT6 129 aaKnown RBP21.39■■□□□ 1.01
COL7A1-207ENST00000467985 GCOM2Q9BZD3 368 aaPredicted RBP21.39■■□□□ 1.01
COL7A1-207ENST00000467985 TMEM150BA6NC51 233 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 FAM205CA6NFA0 338 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 BTBD18B2RXH4 712 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 GRM6O15303 877 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 HOXA2O43364 376 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 IBSPP21815 317 aaPredicted RBP21.38■■□□□ 1.01
COL7A1-207ENST00000467985 SAFBQ15424 915 aaKnown RBP eCLIP21.38■■□□□ 1.01
COL7A1-207ENST00000467985 ZNF410Q86VK4 478 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 SLC7A3Q8WY07 619 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 INO80BQ9C086 356 aaPredicted RBP21.38■■□□□ 1.01
COL7A1-207ENST00000467985 CYP26B1Q9NR63 512 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 AAASQ9NRG9 546 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 SUCLA2Q9P2R7 463 aaPredicted RBP21.38■■□□□ 1.01
COL7A1-207ENST00000467985 PLAGL2Q9UPG8 496 aa21.38■■□□□ 1.01
COL7A1-207ENST00000467985 TBKBP1A7MCY6 615 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 RFC5P40937 340 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 CALCRLQ16602 461 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 C8orf34Q49A92 452 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 TCEAL5Q5H9L2 206 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 OTUD6AQ7L8S5 288 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 C4orf19Q8IY42 314 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 LXNQ9BS40 222 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 ZSWIM4Q9H7M6 989 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 DACT1Q9NYF0 836 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 PCDHB12Q9Y5F1 795 aa21.37■■□□□ 1.01
COL7A1-207ENST00000467985 KIAA1671Q9BY89 1806 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 SFPQP23246 707 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL7A1-207ENST00000467985 GATMP50440 423 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 SPIRE1Q08AE8 756 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 ST3GAL1Q11201 340 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 DRP2Q13474 957 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 COL19A1Q14993 1142 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 CSPP1Q1MSJ5 1256 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 LEXMQ3ZCV2 418 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 PLA2G4FQ68DD2 849 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 NCAPH2Q6IBW4 605 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 PABPC5Q96DU9 382 aaKnown RBP21.36■■□□□ 1.01
COL7A1-207ENST00000467985 CEP170P1Q96L14 293 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 SH2D3AQ9BRG2 576 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 CHST12Q9NRB3 414 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 SH2B1Q9NRF2 756 aaPredicted RBP21.36■■□□□ 1.01
COL7A1-207ENST00000467985 PCDHA12Q9UN75 941 aa21.36■■□□□ 1.01
COL7A1-207ENST00000467985 TCF20Q9UGU0 1960 aaKnown RBP21.36■■□□□ 1.01
COL7A1-207ENST00000467985 FNDC1Q4ZHG4 1894 aaPredicted RBP21.35■■□□□ 1.01
COL7A1-207ENST00000467985 GAS2O43903 313 aaKnown RBP21.35■■□□□ 1.01
COL7A1-207ENST00000467985 NEMFO60524 1076 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 KCNA5P22460 613 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 FOSBP53539 338 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 POLGP54098 1239 aaPredicted RBP21.35■■□□□ 1.01
COL7A1-207ENST00000467985 HMGN5P82970 282 aaKnown RBP21.35■■□□□ 1.01
COL7A1-207ENST00000467985 PUS10Q3MIT2 529 aaKnown RBP21.35■■□□□ 1.01
COL7A1-207ENST00000467985 SPOUT1Q5T280 376 aaKnown RBP21.35■■□□□ 1.01
COL7A1-207ENST00000467985 FAM102BQ5T8I3 360 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 RHPN2Q8IUC4 686 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 CCDC83Q8IWF9 413 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 KLHL23Q8NBE8 558 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 PPP2R3CQ969Q6 453 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 ZNF668Q96K58 619 aaPredicted RBP21.35■■□□□ 1.01
COL7A1-207ENST00000467985 TMEM117Q9H0C3 514 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 ALG13Q9NP73 1137 aaKnown RBP21.35■■□□□ 1.01
COL7A1-207ENST00000467985 MYO7AQ13402 2215 aa21.35■■□□□ 1.01
COL7A1-207ENST00000467985 A0A087WZ62 844 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 EOMESO95936 686 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 ITGB1P05556 798 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 YWHABP31946 246 aaKnown RBP21.34■■□□□ 1.01
COL7A1-207ENST00000467985 NPEPPSP55786 919 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 ECHDC2Q86YB7 292 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 ABI1Q8IZP0 508 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 SPPL3Q8TCT6 385 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 NEK9Q8TD19 979 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 DYDC2Q96IM9 177 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 C8orf76Q96K31 380 aa21.34■■□□□ 1.01
COL7A1-207ENST00000467985 FDXACB1Q9BRP7 624 aaPredicted RBP21.34■■□□□ 1.01
COL7A1-207ENST00000467985 DHX33Q9H6R0 707 aaKnown RBP21.34■■□□□ 1.01
COL7A1-207ENST00000467985 A0A0U1RQF3 1178 aa21.33■■□□□ 1.01
COL7A1-207ENST00000467985 FGFR1P11362 822 aa21.33■■□□□ 1.01
COL7A1-207ENST00000467985 UBE3AQ05086 875 aa21.33■■□□□ 1.01
COL7A1-207ENST00000467985 PSPC1Q8WXF1 523 aaKnown RBP21.33■■□□□ 1.01
COL7A1-207ENST00000467985 RSPH1Q8WYR4 309 aa21.33■■□□□ 1.01
COL7A1-207ENST00000467985 KIF2CQ99661 725 aa21.33■■□□□ 1.01
COL7A1-207ENST00000467985 TTC12Q9H892 705 aaPredicted RBP21.33■■□□□ 1.01
COL7A1-207ENST00000467985 TYW1Q9NV66 732 aaKnown RBP21.33■■□□□ 1.01
COL7A1-207ENST00000467985 RGL1Q9NZL6 768 aa21.33■■□□□ 1.01
COL7A1-207ENST00000467985 WRAP73Q9P2S5 460 aaPredicted RBP21.33■■□□□ 1.01
COL7A1-207ENST00000467985 COL4A3BPQ9Y5P4 624 aa21.33■■□□□ 1.01
COL7A1-207ENST00000467985 SKIP12755 728 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms