RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 SLC44A4Q53GD3 710 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 ODR4Q5SWX8 454 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 ABI1Q8IZP0 508 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 AUTS2Q8WXX7 1259 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 GPKOWQ92917 476 aaPredicted RBP eCLIP13.54□□□□□ -0.242e-6■■□□□ 13
VPS26A-204ENST00000467852 TMEM169Q96HH4 297 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 MYADMQ96S97 322 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 ZBP1Q9H171 429 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 ELAC1Q9H777 363 aaKnown RBP13.54□□□□□ -0.24
VPS26A-204ENST00000467852 LTB4R2Q9NPC1 389 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 MYH15Q9Y2K3 1946 aa13.54□□□□□ -0.24
VPS26A-204ENST00000467852 AKAP13Q12802 2813 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 GPAA1O43292 621 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 MGEA5O60502 916 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 PDHBP11177 359 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 NCLP19338 710 aaKnown RBP13.53□□□□□ -0.24
VPS26A-204ENST00000467852 CCND2P30279 289 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 RPS9P46781 194 aaKnown RBP13.53□□□□□ -0.24
VPS26A-204ENST00000467852 ALDH7A1P49419 539 aaKnown RBP13.53□□□□□ -0.24
VPS26A-204ENST00000467852 GPC5P78333 572 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 ZNF543Q08ER8 600 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 PGM5Q15124 567 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 GNPTABQ3T906 1256 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 STPG1Q5TH74 334 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 CYP26C1Q6V0L0 522 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 PDZD3Q86UT5 571 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 CLDN23Q96B33 292 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 CASD1Q96PB1 797 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 MFRPQ9BY79 579 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.53□□□□□ -0.24
VPS26A-204ENST00000467852 CLUHO75153 1309 aa13.53□□□□□ -0.24
VPS26A-204ENST00000467852 SDK1Q7Z5N4 2213 aa13.52□□□□□ -0.24
VPS26A-204ENST00000467852 ANHXE9PGG2 379 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 RPS6KA5O75582 802 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 CTSAP10619 480 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 LAMP2P13473 410 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 TRIM27P14373 513 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 KLRC2P26717 231 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 TIE1P35590 1138 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 IGBP1P78318 339 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 HTR4Q13639 388 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 CDC37Q16543 378 aaPredicted RBP13.52□□□□□ -0.25
VPS26A-204ENST00000467852 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 CMASQ8NFW8 434 aaPredicted RBP13.52□□□□□ -0.25
VPS26A-204ENST00000467852 OSBP2Q969R2 916 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 NAPBQ9H115 298 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 PCDHA1Q9Y5I3 950 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 NUMBLQ9Y6R0 609 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 LAMA4Q16363 1823 aa13.52□□□□□ -0.25
VPS26A-204ENST00000467852 COL4A3Q01955 1670 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 KDM3AQ9Y4C1 1321 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 CCDC195A0A1B0GUA6 201 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 RRN3P2A6NIE6 340 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 CD72P21854 359 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
VPS26A-204ENST00000467852 NOVA1P51513 510 aaKnown RBP13.51□□□□□ -0.25
VPS26A-204ENST00000467852 POLGP54098 1239 aaPredicted RBP13.51□□□□□ -0.25
VPS26A-204ENST00000467852 FAM189BP81408 668 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 KRT76Q01546 638 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 MTAPQ13126 283 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 ELMSAN1Q6PJG2 1045 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 MAMSTRQ6ZN01 415 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 STOX1Q6ZVD7 989 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 ADAM32Q8TC27 787 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 APPBP2Q92624 585 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 SCNM1Q9BWG6 230 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 EMILIN2Q9BXX0 1053 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 WASF3Q9UPY6 502 aa13.51□□□□□ -0.25
VPS26A-204ENST00000467852 NT5C1B-RDH14C9J2C7 533 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 MARK3P27448 753 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 HSD17B4P51659 736 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 CLCN4P51793 760 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 PFKPQ01813 784 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 SP4Q02446 784 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 ZNF252P-AS1Q0IIN9 211 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 SF3A2Q15428 464 aaKnown RBP13.5□□□□□ -0.25
VPS26A-204ENST00000467852 GPATCH4Q5T3I0 446 aaKnown RBP13.5□□□□□ -0.25
VPS26A-204ENST00000467852 C19orf48Q6RUI8 117 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 FAM9BQ8IZU0 186 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 NME8Q8N427 588 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 KIF1BPQ96EK5 621 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 RHOBTB2Q9BYZ6 727 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
VPS26A-204ENST00000467852 MAP3K20Q9NYL2 800 aaKnown RBP13.5□□□□□ -0.25
VPS26A-204ENST00000467852 ERAP1Q9NZ08 941 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 DPP7Q9UHL4 492 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS26A-204ENST00000467852 MRPS17Q9Y2R5 130 aaKnown RBP13.5□□□□□ -0.25
VPS26A-204ENST00000467852 LAMA5O15230 3695 aa13.5□□□□□ -0.25
VPS26A-204ENST00000467852 GPR182O15218 404 aa13.49□□□□□ -0.25
VPS26A-204ENST00000467852 TDGF1P13385 188 aa13.49□□□□□ -0.25
VPS26A-204ENST00000467852 CNR2P34972 360 aa13.49□□□□□ -0.25
VPS26A-204ENST00000467852 DDX53Q86TM3 631 aaKnown RBP13.49□□□□□ -0.25
VPS26A-204ENST00000467852 UBA5Q9GZZ9 404 aa13.49□□□□□ -0.25
VPS26A-204ENST00000467852 ST3GAL5Q9UNP4 418 aa13.49□□□□□ -0.25
VPS26A-204ENST00000467852 TNNQ9UQP3 1299 aa13.49□□□□□ -0.25
VPS26A-204ENST00000467852 GINS2Q9Y248 185 aa13.49□□□□□ -0.25
VPS26A-204ENST00000467852 CARNS1A5YM72 827 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms