RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 LRFN2Q9ULH4 789 aa20.33■□□□□ 0.85
CGREF1-208ENST00000467539 LOXHD1Q8IVV2 1947 aa20.33■□□□□ 0.84
CGREF1-208ENST00000467539 COL4A6Q14031 1691 aa20.32■□□□□ 0.84
CGREF1-208ENST00000467539 ADGRA3Q8IWK6 1321 aa20.32■□□□□ 0.84
CGREF1-208ENST00000467539 TPH2Q8IWU9 490 aa20.32■□□□□ 0.84
CGREF1-208ENST00000467539 CMTR2Q8IYT2 770 aaKnown RBP20.32■□□□□ 0.84
CGREF1-208ENST00000467539 ZNF579Q8NAF0 562 aaKnown RBP20.32■□□□□ 0.84
CGREF1-208ENST00000467539 CEP170P1Q96L14 293 aa20.32■□□□□ 0.84
CGREF1-208ENST00000467539 LXNQ9BS40 222 aa20.32■□□□□ 0.84
CGREF1-208ENST00000467539 COL25A1Q9BXS0 654 aaPredicted RBP20.32■□□□□ 0.84
CGREF1-208ENST00000467539 DHX33Q9H6R0 707 aaKnown RBP20.32■□□□□ 0.84
CGREF1-208ENST00000467539 ELAC1Q9H777 363 aaKnown RBP20.32■□□□□ 0.84
CGREF1-208ENST00000467539 THEGQ9P2T0 379 aa20.32■□□□□ 0.84
CGREF1-208ENST00000467539 LYPLA2O95372 231 aa20.31■□□□□ 0.84
CGREF1-208ENST00000467539 ZSCAN20P17040 1043 aaPredicted RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 ATP2B1P20020 1258 aa20.31■□□□□ 0.84
CGREF1-208ENST00000467539 YWHABP31946 246 aaKnown RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 MRPS5P82675 430 aaKnown RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 ORC2Q13416 577 aaPredicted RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 CTTNQ14247 550 aaKnown RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 PLA2G4FQ68DD2 849 aa20.31■□□□□ 0.84
CGREF1-208ENST00000467539 NLRP7Q8WX94 980 aa20.31■□□□□ 0.84
CGREF1-208ENST00000467539 SYMPKQ92797 1274 aaKnown RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 MRPL38Q96DV4 380 aaKnown RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 ZNF668Q96K58 619 aaPredicted RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 ASB2Q96Q27 587 aa20.31■□□□□ 0.84
CGREF1-208ENST00000467539 GCOM2Q9BZD3 368 aaPredicted RBP20.31■□□□□ 0.84
CGREF1-208ENST00000467539 TMEM60Q9H2L4 133 aa20.31■□□□□ 0.84
CGREF1-208ENST00000467539 ZBTB39O15060 712 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 U2AF2P26368 475 aaKnown RBP eCLIP20.3■□□□□ 0.84
CGREF1-208ENST00000467539 MCM7P33993 719 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 RFC5P40937 340 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 MCM2P49736 904 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 SKIV2LQ15477 1246 aaKnown RBP20.3■□□□□ 0.84
CGREF1-208ENST00000467539 PTPROQ16827 1216 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 TJAP1Q5JTD0 557 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 ZNF410Q86VK4 478 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 NOSTRINQ8IVI9 506 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 NEK9Q8TD19 979 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 SLC7A3Q8WY07 619 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 TMX3Q96JJ7 454 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 TBC1D32Q96NH3 1257 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 PLVAPQ9BX97 442 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 INO80BQ9C086 356 aaPredicted RBP20.3■□□□□ 0.84
CGREF1-208ENST00000467539 TMEM161AQ9NX61 479 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 COG5Q9UP83 839 aa20.3■□□□□ 0.84
CGREF1-208ENST00000467539 A0A087WZ62 844 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 XRCC6P12956 609 aaKnown RBP eCLIP20.29■□□□□ 0.84
CGREF1-208ENST00000467539 TRAPPC10P48553 1259 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 CYP4A11Q02928 519 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 GNL2Q13823 731 aaKnown RBP20.29■□□□□ 0.84
CGREF1-208ENST00000467539 ZNF174Q15697 407 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 NAALADL2Q58DX5 795 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 XKR9Q5GH70 373 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 RHPN2Q8IUC4 686 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 SCLT1Q96NL6 688 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 FDXACB1Q9BRP7 624 aaPredicted RBP20.29■□□□□ 0.84
CGREF1-208ENST00000467539 ATP6V0A4Q9HBG4 840 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 CHST12Q9NRB3 414 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 ANKEF1Q9NU02 776 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 KIF3AQ9Y496 699 aa20.29■□□□□ 0.84
CGREF1-208ENST00000467539 ASAP2O43150 1006 aa20.28■□□□□ 0.84
CGREF1-208ENST00000467539 GAS2O43903 313 aaKnown RBP20.28■□□□□ 0.84
CGREF1-208ENST00000467539 CTNNB1P35222 781 aa20.28■□□□□ 0.84
CGREF1-208ENST00000467539 POLGP54098 1239 aaPredicted RBP20.28■□□□□ 0.84
CGREF1-208ENST00000467539 FAM102BQ5T8I3 360 aa20.28■□□□□ 0.84
CGREF1-208ENST00000467539 PRPF31Q8WWY3 499 aaKnown RBP20.28■□□□□ 0.84
CGREF1-208ENST00000467539 P2RX5Q93086 422 aa20.28■□□□□ 0.84
CGREF1-208ENST00000467539 C11orf84Q9BUA3 381 aaPredicted RBP20.28■□□□□ 0.84
CGREF1-208ENST00000467539 MRPL42Q9Y6G3 142 aaKnown RBP20.28■□□□□ 0.84
CGREF1-208ENST00000467539 SPTBN5Q9NRC6 3674 aaKnown RBP20.28■□□□□ 0.84
CGREF1-208ENST00000467539 REV3LO60673 3130 aa20.28■□□□□ 0.84
CGREF1-208ENST00000467539 CSDE1O75534 798 aaKnown RBP20.27■□□□□ 0.84
CGREF1-208ENST00000467539 CD2BP2O95400 341 aaKnown RBP20.27■□□□□ 0.84
CGREF1-208ENST00000467539 FGFR4P22455 802 aa20.27■□□□□ 0.84
CGREF1-208ENST00000467539 GATMP50440 423 aa20.27■□□□□ 0.84
CGREF1-208ENST00000467539 AAK1Q2M2I8 961 aa20.27■□□□□ 0.84
CGREF1-208ENST00000467539 KSR1Q8IVT5 923 aa20.27■□□□□ 0.84
CGREF1-208ENST00000467539 C4orf32Q8N8J7 132 aa20.27■□□□□ 0.84
CGREF1-208ENST00000467539 TCP11Q8WWU5 503 aa20.27■□□□□ 0.84
CGREF1-208ENST00000467539 HLA-CQ95604 372 aa20.27■□□□□ 0.84
CGREF1-208ENST00000467539 LMAN2LQ9H0V9 348 aa20.27■□□□□ 0.84
CGREF1-208ENST00000467539 A0A0U1RQF3 1178 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 EOMESO95936 686 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 SPATA31C1P0DKV0 1188 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 PAN2Q504Q3 1202 aaKnown RBP20.26■□□□□ 0.83
CGREF1-208ENST00000467539 TTC38Q5R3I4 469 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 ECHDC2Q86YB7 292 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 PSPC1Q8WXF1 523 aaKnown RBP20.26■□□□□ 0.83
CGREF1-208ENST00000467539 TMEM143Q96AN5 459 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 TRAIPQ9BWF2 469 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 IFT122Q9HBG6 1241 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 DACT1Q9NYF0 836 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 NOL7Q9UMY1 257 aaKnown RBP20.26■□□□□ 0.83
CGREF1-208ENST00000467539 PLAGL2Q9UPG8 496 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 COL4A3BPQ9Y5P4 624 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 CUL9Q8IWT3 2517 aa20.26■□□□□ 0.83
CGREF1-208ENST00000467539 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.25■□□□□ 0.83
CGREF1-208ENST00000467539 GRM6O15303 877 aa20.25■□□□□ 0.83
CGREF1-208ENST00000467539 IBSPP21815 317 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms