RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 PLS1Q14651 629 aa11.94□□□□□ -0.5
SFXN3-204ENST00000466982 IFI16Q16666 785 aaKnown RBP11.94□□□□□ -0.5
SFXN3-204ENST00000466982 ZNF394Q53GI3 561 aa11.94□□□□□ -0.5
SFXN3-204ENST00000466982 SMUG1Q53HV7 270 aa11.94□□□□□ -0.5
SFXN3-204ENST00000466982 CABP7Q86V35 215 aa11.94□□□□□ -0.5
SFXN3-204ENST00000466982 EPS8L3Q8TE67 593 aaKnown RBP11.94□□□□□ -0.5
SFXN3-204ENST00000466982 TXLNGYQ9BZA5 131 aa11.94□□□□□ -0.5
SFXN3-204ENST00000466982 RNF41Q9H4P4 317 aaPredicted RBP11.94□□□□□ -0.5
SFXN3-204ENST00000466982 DBR1Q9UK59 544 aaKnown RBP11.94□□□□□ -0.5
SFXN3-204ENST00000466982 NAT2P11245 290 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 CREB1P16220 341 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 RNF220Q5VTB9 566 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 BLIDQ8IZY5 108 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 KIFAP3Q92845 792 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 GLG1Q92896 1179 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 UTP4Q969X6 686 aaKnown RBP11.93□□□□□ -0.5
SFXN3-204ENST00000466982 ZNF512BQ96KM6 892 aaPredicted RBP11.93□□□□□ -0.5
SFXN3-204ENST00000466982 ISCA1Q9BUE6 129 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 LSM14BQ9BX40 385 aaKnown RBP11.93□□□□□ -0.5
SFXN3-204ENST00000466982 MOV10L1Q9BXT6 1211 aaKnown RBP11.93□□□□□ -0.5
SFXN3-204ENST00000466982 CCSER1Q9C0I3 900 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 TCP11X1B4DZS4 312 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 RGS16O15492 202 aaPredicted RBP11.93□□□□□ -0.5
SFXN3-204ENST00000466982 TIMM44O43615 452 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 PFDN1O60925 122 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 HSPA1LP34931 641 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 PCK1P35558 622 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 KLHL30Q0D2K2 578 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 SMC1BQ8NDV3 1235 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 CTNNBL1Q8WYA6 563 aaPredicted RBP11.93□□□□□ -0.5
SFXN3-204ENST00000466982 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 RAB17Q9H0T7 212 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 RHBDL2Q9NX52 303 aa11.93□□□□□ -0.5
SFXN3-204ENST00000466982 USP15Q9Y4E8 981 aaPredicted RBP11.93□□□□□ -0.5
SFXN3-204ENST00000466982 OAS1P00973 400 aaKnown RBP11.92□□□□□ -0.5
SFXN3-204ENST00000466982 PLTPP55058 493 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 ATP11AP98196 1134 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 MECOMQ03112 1051 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 PPP2R5BQ15173 497 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 LRRC55Q6ZSA7 311 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 ASRGL1Q7L266 308 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 NANOGNBQ7Z5D8 188 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 DAAM2Q86T65 1068 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 LRRC57Q8N9N7 239 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 BHMTQ93088 406 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 DCAF5Q96JK2 942 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 TRAPPC9Q96Q05 1148 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 RPS6KC1Q96S38 1066 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 UTP11Q9Y3A2 253 aaKnown RBP11.92□□□□□ -0.5
SFXN3-204ENST00000466982 N6AMT1Q9Y5N5 214 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 IDO1P14902 403 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 LACTBP83111 547 aaPredicted RBP11.92□□□□□ -0.5
SFXN3-204ENST00000466982 CNGA2Q16280 664 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 PFKFB3Q16875 520 aaPredicted RBP11.92□□□□□ -0.5
SFXN3-204ENST00000466982 OTUD6AQ7L8S5 288 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 EXOC3L1Q86VI1 746 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 LSM14AQ8ND56 463 aaKnown RBP11.92□□□□□ -0.5
SFXN3-204ENST00000466982 FGD4Q96M96 766 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 C7orf25Q9BPX7 421 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 ZMYND12Q9H0C1 365 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 SEMA4AQ9H3S1 761 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 RETREG1Q9H6L5 497 aa11.92□□□□□ -0.5
SFXN3-204ENST00000466982 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
SFXN3-204ENST00000466982 GM2AP17900 193 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 GNAZP19086 355 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 HOXD12P35452 270 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 PSMD7P51665 324 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 PMS2P54278 862 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 EIF3BP55884 814 aaKnown RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 PLOD1Q02809 727 aaPredicted RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 PTK2Q05397 1052 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 FAM47AQ5JRC9 791 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 APBB1IPQ7Z5R6 666 aaPredicted RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 ANKLE1Q8NAG6 615 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 SEC14L1Q92503 715 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 CEP72Q9P209 647 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 SNX24Q9Y343 169 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 SPO11Q9Y5K1 396 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 MEGF6O75095 1541 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 PHRF1Q9P1Y6 1649 aaKnown RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 MYMKA6NI61 221 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 H0Y3Z8 333 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 LSM1O15116 133 aaKnown RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 RFC5P40937 340 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 PDE6CP51160 858 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 CLCN2P51788 898 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 ZNF131P52739 623 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 RAD23BP54727 409 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 POU5F1Q01860 360 aaKnown RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 MGAT5Q09328 741 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 SOGA3Q5TF21 947 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 CNNM4Q6P4Q7 775 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 TMEM154Q6P9G4 183 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 FBXO25Q8TCJ0 367 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 PGM2Q96G03 612 aa11.91□□□□□ -0.5
SFXN3-204ENST00000466982 PABPC3Q9H361 631 aaKnown RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 LUC7LQ9NQ29 371 aaKnown RBP11.91□□□□□ -0.5
SFXN3-204ENST00000466982 ZDHHC18Q9NUE0 388 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms