RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 RUFY4Q6ZNE9 571 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 METTL13Q8N6R0 699 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 PSPC1Q8WXF1 523 aaKnown RBP16.85■□□□□ 0.29
NPHP4-205ENST00000466897 DHX38Q92620 1227 aaKnown RBP16.85■□□□□ 0.29
NPHP4-205ENST00000466897 DDX12PQ92771 950 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 PAGE5Q96GU1 130 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 MAP7D2Q96T17 732 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 C7orf25Q9BPX7 421 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 TRIM9Q9C026 710 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 SUGCTQ9HAC7 445 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 TBX21Q9UL17 535 aa16.85■□□□□ 0.29
NPHP4-205ENST00000466897 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 CLCN3P51790 818 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 POU5F1BQ06416 359 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 MAPK7Q13164 816 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 BFSP2Q13515 415 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 GIT2Q14161 759 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 TPRNQ4KMQ1 711 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 LRRC71Q8N4P6 559 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 DNAJC19Q96DA6 116 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 ZBTB10Q96DT7 871 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 REEP2Q9BRK0 252 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 KCNG1Q9UIX4 513 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 HOOK1Q9UJC3 728 aaKnown RBP16.84■□□□□ 0.29
NPHP4-205ENST00000466897 ATP11BQ9Y2G3 1177 aa16.84■□□□□ 0.29
NPHP4-205ENST00000466897 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.28
NPHP4-205ENST00000466897 HIP1RO75146 1068 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 DRP2Q13474 957 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 DHX8Q14562 1220 aaKnown RBP16.83■□□□□ 0.28
NPHP4-205ENST00000466897 PPP2R5AQ15172 486 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 FAM26DQ5JW98 314 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 DAW1Q8N136 415 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 GPT2Q8TD30 523 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 DNAJB3Q8WWF6 145 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 KCNN1Q92952 543 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 WNT8BQ93098 351 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 TMEM143Q96AN5 459 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 NFKBIZQ9BYH8 718 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 SUCLA2Q9P2R7 463 aaPredicted RBP16.83■□□□□ 0.28
NPHP4-205ENST00000466897 COL4A3BPQ9Y5P4 624 aa16.83■□□□□ 0.28
NPHP4-205ENST00000466897 PVALEFA0A1B0GWK0 134 aa16.82■□□□□ 0.28
NPHP4-205ENST00000466897 KIAA0355O15063 1070 aa16.82■□□□□ 0.28
NPHP4-205ENST00000466897 PARNO95453 639 aaKnown RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 KRT18P05783 430 aaKnown RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 CKBP12277 381 aa16.82■□□□□ 0.28
NPHP4-205ENST00000466897 SCP2P22307 547 aa16.82■□□□□ 0.28
NPHP4-205ENST00000466897 MDM2Q00987 491 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 FAM102BQ5T8I3 360 aa16.82■□□□□ 0.28
NPHP4-205ENST00000466897 ZNF410Q86VK4 478 aa16.82■□□□□ 0.28
NPHP4-205ENST00000466897 PRPF31Q8WWY3 499 aaKnown RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 NTPCRQ9BSD7 190 aaKnown RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 NOC4LQ9BVI4 516 aaKnown RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 FAM49AQ9H0Q0 323 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 POLR3FQ9H1D9 316 aaPredicted RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 LARSQ9P2J5 1176 aaKnown RBP16.82■□□□□ 0.28
NPHP4-205ENST00000466897 SEL1LQ9UBV2 794 aa16.82■□□□□ 0.28
NPHP4-205ENST00000466897 AKT3Q9Y243 479 aa16.82■□□□□ 0.28
NPHP4-205ENST00000466897 M0QZ92 97 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 TBCAO75347 108 aaKnown RBP16.81■□□□□ 0.28
NPHP4-205ENST00000466897 GPR32O75388 356 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 PLS3P13797 630 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 GAP43P17677 238 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 GLRA2P23416 452 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 THPOP40225 353 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 NAMPTP43490 491 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 AFMP43652 599 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 GPC3P51654 580 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 MRPS6P82932 125 aaKnown RBP16.81■□□□□ 0.28
NPHP4-205ENST00000466897 MGAT3Q09327 533 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 LAMTOR4Q0VGL1 99 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 TFDP1Q14186 410 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 POSTNQ15063 836 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 FAM43BQ6ZT52 329 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-205ENST00000466897 UNC13DQ70J99 1090 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 IFNLR1Q8IU57 520 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-205ENST00000466897 SLC17A8Q8NDX2 589 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 SPIRE2Q8WWL2 714 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 IFT74Q96LB3 600 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 HIPK3Q9H422 1215 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 PARVGQ9HBI0 331 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 GPRC5CQ9NQ84 441 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 SQORQ9Y6N5 450 aa16.81■□□□□ 0.28
NPHP4-205ENST00000466897 SCN5AQ14524 2016 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 PHLPP2Q6ZVD8 1323 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 NPHP3-ACAD11A0A0J9YXS1 232 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 FAM13AO94988 1023 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 VTNP04004 478 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 MAPTP10636 758 aaKnown RBP16.8■□□□□ 0.28
NPHP4-205ENST00000466897 SELPP16109 830 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 CRYBB1P53674 252 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-205ENST00000466897 ASIC1P78348 528 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 EHHADHQ08426 723 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 DPYDQ12882 1025 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 DMP1Q13316 513 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-205ENST00000466897 CUL4BQ13620 913 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 CAPSQ13938 189 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 CDCA2Q69YH5 1023 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-205ENST00000466897 TRAF7Q6Q0C0 670 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 MAEAQ7L5Y9 396 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms