RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 SFPQP23246 707 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL7A1-206ENST00000466591 CA8P35219 290 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 NRIP1P48552 1158 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 ANAPC15P60006 121 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 PSMC5P62195 406 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 UBE3AQ05086 875 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 RHPN2Q8IUC4 686 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 LRRC43Q8N309 656 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 SPPL3Q8TCT6 385 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 TMEM117Q9H0C3 514 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 TLE6Q9H808 572 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 TLR9Q9NR96 1032 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 TYW1Q9NV66 732 aaKnown RBP19.67■□□□□ 0.74
COL7A1-206ENST00000466591 TPCN1Q9ULQ1 816 aa19.67■□□□□ 0.74
COL7A1-206ENST00000466591 REV3LO60673 3130 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 PFKFB2O60825 505 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 FGF18O76093 207 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 ALADP13716 330 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 KRT2P35908 639 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 CRIPAKQ8N1N5 446 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 SLC7A3Q8WY07 619 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 FAM20AQ96MK3 541 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 NLRP4Q96MN2 994 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 CCDC43Q96MW1 224 aaKnown RBP19.66■□□□□ 0.74
COL7A1-206ENST00000466591 SH2D3AQ9BRG2 576 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 PHF20Q9BVI0 1012 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 INO80BQ9C086 356 aaPredicted RBP19.66■□□□□ 0.74
COL7A1-206ENST00000466591 ENTPD7Q9NQZ7 604 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 PRKAG3Q9UGI9 489 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 CD207Q9UJ71 328 aa19.66■□□□□ 0.74
COL7A1-206ENST00000466591 FSD2A1L4K1 749 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 SLC37A4O43826 429 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 DARSP14868 501 aaKnown RBP19.65■□□□□ 0.74
COL7A1-206ENST00000466591 FGFR4P22455 802 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 GTF2F1P35269 517 aaKnown RBP eCLIP19.65■□□□□ 0.74
COL7A1-206ENST00000466591 QARSP47897 775 aaKnown RBP19.65■□□□□ 0.74
COL7A1-206ENST00000466591 POLGP54098 1239 aaPredicted RBP19.65■□□□□ 0.74
COL7A1-206ENST00000466591 AK2P54819 239 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 KRT17Q04695 432 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 BMS1Q14692 1282 aaKnown RBP19.65■□□□□ 0.74
COL7A1-206ENST00000466591 TWF2Q6IBS0 349 aaKnown RBP19.65■□□□□ 0.74
COL7A1-206ENST00000466591 EXOC8Q8IYI6 725 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 COLGALT1Q8NBJ5 622 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 TMEM87AQ8NBN3 555 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 ETNPPLQ8TBG4 499 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 ZNF558Q96NG5 402 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 NIFKQ9BYG3 293 aaKnown RBP19.65■□□□□ 0.74
COL7A1-206ENST00000466591 ADAMTS10Q9H324 1103 aa19.65■□□□□ 0.74
COL7A1-206ENST00000466591 SUCLA2Q9P2R7 463 aaPredicted RBP19.65■□□□□ 0.74
COL7A1-206ENST00000466591 TMEM150BA6NC51 233 aa19.64■□□□□ 0.73
COL7A1-206ENST00000466591 LINC01565O15544 149 aa19.64■□□□□ 0.73
COL7A1-206ENST00000466591 DNAJB1P25685 340 aa19.64■□□□□ 0.73
COL7A1-206ENST00000466591 IRS1P35568 1242 aa19.64■□□□□ 0.73
COL7A1-206ENST00000466591 PPM1AP35813 382 aa19.64■□□□□ 0.73
COL7A1-206ENST00000466591 SMAD4Q13485 552 aaKnown RBP19.64■□□□□ 0.73
COL7A1-206ENST00000466591 PLA2G4FQ68DD2 849 aa19.64■□□□□ 0.73
COL7A1-206ENST00000466591 NCAPH2Q6IBW4 605 aa19.64■□□□□ 0.73
COL7A1-206ENST00000466591 CEP170P1Q96L14 293 aa19.64■□□□□ 0.73
COL7A1-206ENST00000466591 PIN4Q9Y237 131 aaKnown RBP19.64■□□□□ 0.73
COL7A1-206ENST00000466591 KIAA1671Q9BY89 1806 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 FAM86C2PA6NEL3 165 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 M0R2N6 131 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 EDIL3O43854 480 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 TBX10O75333 385 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 CSDE1O75534 798 aaKnown RBP19.63■□□□□ 0.73
COL7A1-206ENST00000466591 FOSBP53539 338 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 DLX2Q07687 328 aaPredicted RBP19.63■□□□□ 0.73
COL7A1-206ENST00000466591 DSC3Q14574 896 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 PPP4R3AQ6IN85 833 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 PDE12Q6L8Q7 609 aaKnown RBP19.63■□□□□ 0.73
COL7A1-206ENST00000466591 OTUD6AQ7L8S5 288 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 CATSPER4Q7RTX7 472 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 ADGRD2Q7Z7M1 963 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 ECHDC2Q86YB7 292 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 ADHFE1Q8IWW8 467 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 SLFN12Q8IYM2 578 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 LINC01465Q8N7H1 131 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 NECAB1Q8N987 351 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 MBOAT7Q96N66 472 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 MRPL9Q9BYD2 267 aaKnown RBP19.63■□□□□ 0.73
COL7A1-206ENST00000466591 CD320Q9NPF0 282 aa19.63■□□□□ 0.73
COL7A1-206ENST00000466591 A0A087WZ62 844 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 MBTPS2O43462 519 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 DTNBO60941 627 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 P4HBP07237 508 aaKnown RBP19.62■□□□□ 0.73
COL7A1-206ENST00000466591 SKIP12755 728 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 LTBRP36941 435 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 FAM189BP81408 668 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 PPP2R5CQ13362 524 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 ADAM15Q13444 863 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 DRP2Q13474 957 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 COL19A1Q14993 1142 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 TARBP2Q15633 366 aaKnown RBP19.62■□□□□ 0.73
COL7A1-206ENST00000466591 CTC1Q2NKJ3 1217 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 PLPP4Q5VZY2 271 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 ERICH6BQ5W0A0 696 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 ZNF410Q86VK4 478 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 EFHBQ8N7U6 833 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 HELQQ8TDG4 1101 aa19.62■□□□□ 0.73
COL7A1-206ENST00000466591 TCF25Q9BQ70 676 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms