RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 C7orf61Q8IZ16 206 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 KLHL23Q8NBE8 558 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 BVESQ8NE79 360 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 OR2W6PQ8NHA6 318 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 U2AF1L4Q8WU68 220 aaKnown RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 DPF2Q92785 391 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 PTPRN2Q92932 1015 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 DCPSQ96C86 337 aaKnown RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 ACSF2Q96CM8 615 aaPredicted RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 SCYL1Q96KG9 808 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 CCDC74BQ96LY2 380 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 HAUS7Q99871 368 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 MAF1Q9H063 256 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 KLHL25Q9H0H3 589 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 TSPYL1Q9H0U9 437 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 VPS33BQ9H267 617 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 TSPY26PQ9H489 355 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 GGA3Q9NZ52 723 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 LRP2BPQ9P2M1 347 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 SUSD2Q9UGT4 822 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 CNOT7Q9UIV1 285 aaKnown RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 PNMA8BQ9ULN7 279 aaPredicted RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 NOB1Q9ULX3 412 aaKnown RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 TRIM33Q9UPN9 1127 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 PAXBP1Q9Y5B6 917 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 CORINQ9Y5Q5 1042 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 OTOFQ9HC10 1997 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 CCDC171Q6TFL3 1326 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 SALL3Q9BXA9 1300 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 MGAMO43451 1857 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 PLXNA3P51805 1871 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 SCN9AQ15858 1988 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 FAM86C2PA6NEL3 165 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 NOP56O00567 594 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 ATP8B1O43520 1251 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 CLEC3AO75596 197 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 REC8O95072 547 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 LDHAP00338 332 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 CPP00450 1065 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 TGFB1P01137 390 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 CCL5P13501 91 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 MX1P20591 662 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 EPHA1P21709 976 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 GRK4P32298 578 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 IRAK1P51617 712 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 PRMT2P55345 433 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 GSTM4Q03013 218 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 EXOSC9Q06265 439 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 DHX8Q14562 1220 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 TERF2Q15554 542 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 TMEM240Q5SV17 173 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 PKN3Q6P5Z2 889 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 RBM43Q6ZSC3 357 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 SLC51AQ86UW1 340 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 HID1Q8IV36 788 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 TRIM59Q8IWR1 403 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.97□□□□□ -1.772e-7■■■□□ 14.7
SORT1-202ENST00000466471 MSL3Q8N5Y2 521 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 UBR7Q8N806 425 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 ANKRD44Q8N8A2 993 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 ZNF513Q8N8E2 541 aaPredicted RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 LRRN4CLQ8ND94 238 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 FAM13CQ8NE31 585 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 LEO1Q8WVC0 666 aaPredicted RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 KCTD13Q8WZ19 329 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 USP7Q93009 1102 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 OSBP2Q969R2 916 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 KIF1BPQ96EK5 621 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 TMEM87BQ96K49 555 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 MRGPRX3Q96LB0 322 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 SLC6A18Q96N87 628 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 UBL7Q96S82 380 aaPredicted RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 API5Q9BZZ5 524 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 CCDC86Q9H6F5 360 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 YY1AP1Q9H869 796 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 SMC4Q9NTJ3 1288 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 CGNQ9P2M7 1197 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 STOML1Q9UBI4 398 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 PCDHB10Q9UN67 800 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 ZBTB1Q9Y2K1 713 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 RAXQ9Y2V3 346 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 PCDHGC5Q9Y5F6 944 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 OAS3Q9Y6K5 1087 aaKnown RBP3.97□□□□□ -1.77
SORT1-202ENST00000466471 LRRC37AA6NMS7 1700 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 DUOX1Q9NRD9 1551 aa3.97□□□□□ -1.77
SORT1-202ENST00000466471 CCDC66A2RUB6 948 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 SMTNL1A8MU46 457 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 H7C1D1 291 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 LINC01387J3KSC0 135 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 AQP7O14520 342 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 ERC2O15083 957 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 ZZEF1O43149 2961 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 PPIP5K2O43314 1243 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 CBFA2T2O43439 604 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 ZNF862O60290 1169 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 OPA1O60313 960 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 PPFIA4O75335 1185 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 ULK1O75385 1050 aa3.96□□□□□ -1.78
SORT1-202ENST00000466471 KATNA1O75449 491 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms