RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 TRIM49P0CI25 452 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 TRIM49CP0CI26 452 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 MAATS1Q7Z4T9 603 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 STK33Q9BYT3 514 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 ZNF646O15015 1829 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-212ENST00000466410 GAS7O60861 476 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 PRELPP51888 382 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 CUL1Q13616 776 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 NFIL3Q16649 462 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 KDM7AQ6ZMT4 941 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 FAM178BQ8IXR5 827 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 RASGEF1CQ8N431 466 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 MKNK1Q9BUB5 465 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 AGPAT3Q9NRZ7 376 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 AMACRQ9UHK6 382 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 FRMPD4Q14CM0 1322 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 BHMG1C9JSJ3 638 aaPredicted RBP21.06■□□□□ 0.96
LIMS2-212ENST00000466410 GCOM1H8Y6P7 765 aaPredicted RBP21.06■□□□□ 0.96
LIMS2-212ENST00000466410 POLR2MP0CAP2 368 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 SF3B2Q13435 895 aaKnown RBP21.06■□□□□ 0.96
LIMS2-212ENST00000466410 AOC3Q16853 763 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 CEP85LQ5SZL2 805 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 SYCE1Q8N0S2 351 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 EIF1ADQ8N9N8 165 aaKnown RBP21.06■□□□□ 0.96
LIMS2-212ENST00000466410 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.06■□□□□ 0.967e-7■■■■■ 58.9
LIMS2-212ENST00000466410 HES6Q96HZ4 224 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 ATP6V1G3Q96LB4 118 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 GPR88Q9GZN0 384 aa21.06■□□□□ 0.96
LIMS2-212ENST00000466410 IGSF9BQ9UPX0 1349 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 ZEB2O60315 1214 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 BUB1BO60566 1050 aaPredicted RBP21.05■□□□□ 0.96
LIMS2-212ENST00000466410 HSD17B3P37058 310 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 ZNF131P52739 623 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 NPEPPSP55786 919 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 GUCY1A3Q02108 690 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 ODR4Q5SWX8 454 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 HS2ST1Q7LGA3 356 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 SLC35G2Q8TBE7 412 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.05■□□□□ 0.96
LIMS2-212ENST00000466410 DMAC2Q9NW81 257 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 SAMM50Q9Y512 469 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 ARP10275 920 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 NR1D1P20393 614 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 ABCB4P21439 1286 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 UAP1Q16222 522 aaPredicted RBP21.05■□□□□ 0.96
LIMS2-212ENST00000466410 BANK1Q8NDB2 785 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 SYT11Q9BT88 431 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 UNC45AQ9H3U1 944 aa21.05■□□□□ 0.96
LIMS2-212ENST00000466410 CCDC188H7C350 402 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 OR2W6PQ8NHA6 318 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 NACC1Q96RE7 527 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 INTS2Q9H0H0 1204 aaKnown RBP21.04■□□□□ 0.96
LIMS2-212ENST00000466410 SEL1LQ9UBV2 794 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 FRMD4BQ9Y2L6 1034 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 RBBP6Q7Z6E9 1792 aaKnown RBP21.04■□□□□ 0.96
LIMS2-212ENST00000466410 A6NNZ2 444 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 LMNB1P20700 586 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 FLT3P36888 993 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 TUBB8Q3ZCM7 444 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 CEP55Q53EZ4 464 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 CC2D2BQ6DHV5 1058 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 SAMD1Q6SPF0 538 aaPredicted RBP21.04■□□□□ 0.96
LIMS2-212ENST00000466410 RDH13Q8NBN7 331 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 AMFRQ9UKV5 643 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 PPP1R9AQ9ULJ8 1098 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 FAM169AQ9Y6X4 670 aa21.04■□□□□ 0.96
LIMS2-212ENST00000466410 DAPK3O43293 454 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 EMC10Q5UCC4 262 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 RFFLQ8WZ73 363 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 ZNF577Q9BSK1 485 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 ARHGEF10LQ9HCE6 1279 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 MYH11P35749 1972 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 TCP10L2B9ZVM9 353 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 H0YGN5 161 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 NDUFAB1O14561 156 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 TTI1O43156 1089 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 LSP1P33241 339 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 ARHGAP44Q17R89 818 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 PALB2Q86YC2 1186 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 EFCAB13Q8IY85 973 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 C1orf131Q8NDD1 294 aaKnown RBP21.03■□□□□ 0.96
LIMS2-212ENST00000466410 CELF4Q9BZC1 486 aaKnown RBP21.03■□□□□ 0.96
LIMS2-212ENST00000466410 TMBIM4Q9HC24 238 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 TAS2R14Q9NYV8 317 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 APEX2Q9UBZ4 518 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 TMX2Q9Y320 296 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 NR2E1Q9Y466 385 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 NFS1Q9Y697 457 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 NCANO14594 1321 aa21.03■□□□□ 0.96
LIMS2-212ENST00000466410 TMEM253P0C7T8 217 aa21.02■□□□□ 0.96
LIMS2-212ENST00000466410 PLS1Q14651 629 aa21.02■□□□□ 0.96
LIMS2-212ENST00000466410 ARHGEF26Q96DR7 871 aa21.02■□□□□ 0.96
LIMS2-212ENST00000466410 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.02■□□□□ 0.96
LIMS2-212ENST00000466410 HMGB1P1B2RPK0 211 aaPredicted RBP21.02■□□□□ 0.96
LIMS2-212ENST00000466410 MYL7Q01449 175 aa21.02■□□□□ 0.96
LIMS2-212ENST00000466410 PPATQ06203 517 aa21.02■□□□□ 0.96
LIMS2-212ENST00000466410 PPM1EQ8WY54 764 aa21.02■□□□□ 0.96
LIMS2-212ENST00000466410 CTNNBL1Q8WYA6 563 aaPredicted RBP21.02■□□□□ 0.96
LIMS2-212ENST00000466410 LXNQ9BS40 222 aa21.02■□□□□ 0.96
LIMS2-212ENST00000466410 CENPHQ9H3R5 247 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms