RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 CDHR1Q96JP9 859 aa20.03■□□□□ 0.8
LETM1-202ENST00000466175 DRC1Q96MC2 740 aa20.03■□□□□ 0.8
LETM1-202ENST00000466175 CCDC43Q96MW1 224 aaKnown RBP20.03■□□□□ 0.8
LETM1-202ENST00000466175 IWS1Q96ST2 819 aa20.03■□□□□ 0.8
LETM1-202ENST00000466175 HOXC10Q9NYD6 342 aa20.03■□□□□ 0.8
LETM1-202ENST00000466175 RLFQ13129 1914 aa20.03■□□□□ 0.8
LETM1-202ENST00000466175 PRLRP16471 622 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 RARRES1P49788 294 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 MAPK7Q13164 816 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 BRD3Q15059 726 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 CATSPERGQ6ZRH7 1159 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 VSIG10LQ86VR7 867 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 NSUN6Q8TEA1 469 aaKnown RBP20.02■□□□□ 0.8
LETM1-202ENST00000466175 CAPNS2Q96L46 248 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 CRACR2AQ9BSW2 395 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 ST6GALNAC4Q9H4F1 302 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 OTOFQ9HC10 1997 aa20.02■□□□□ 0.8
LETM1-202ENST00000466175 CLIC2O15247 247 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 USP2O75604 605 aaPredicted RBP20.02■□□□□ 0.79
LETM1-202ENST00000466175 PLS3P13797 630 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 PON1P27169 355 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 HMGCS2P54868 508 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 FKBP1BP68106 108 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 DGKZQ13574 1117 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 RAPGEF1Q13905 1077 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 BAATQ14032 418 aaPredicted RBP20.02■□□□□ 0.79
LETM1-202ENST00000466175 DCAF17Q5H9S7 520 aaPredicted RBP20.02■□□□□ 0.79
LETM1-202ENST00000466175 TCERG1LQ5VWI1 586 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 SNRNP48Q6IEG0 339 aaKnown RBP20.02■□□□□ 0.79
LETM1-202ENST00000466175 C12orf56Q8IXR9 622 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 MSANTD4Q8NCY6 345 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 TEX13BQ9BXU2 312 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 AGPAT3Q9NRZ7 376 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 PKD2L1Q9P0L9 805 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 ATP8B3O60423 1300 aa20.02■□□□□ 0.79
LETM1-202ENST00000466175 UCHL3P15374 230 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 YWHABP31946 246 aaKnown RBP20.01■□□□□ 0.79
LETM1-202ENST00000466175 ZNF157P51786 506 aaPredicted RBP20.01■□□□□ 0.79
LETM1-202ENST00000466175 KCNA1Q09470 495 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 KLHL30Q0D2K2 578 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 SLC18A3Q16572 532 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 ZC2HC1CQ53FD0 456 aaPredicted RBP20.01■□□□□ 0.79
LETM1-202ENST00000466175 SH3D19Q5HYK7 790 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 IQCEQ6IPM2 695 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 RGMBQ6NW40 437 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 DPY19L2P1Q6NXN4 242 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 SYCP3Q8IZU3 236 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 CLMNQ96JQ2 1002 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 ACCSQ96QU6 501 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 SPAG5Q96R06 1193 aa20.01■□□□□ 0.79
LETM1-202ENST00000466175 PUF60Q9UHX1 559 aaKnown RBP20.01■□□□□ 0.79
LETM1-202ENST00000466175 COL11A1P12107 1806 aaPredicted RBP20■□□□□ 0.79
LETM1-202ENST00000466175 TLR2O60603 784 aa20■□□□□ 0.79
LETM1-202ENST00000466175 NR3C2P08235 984 aa20■□□□□ 0.79
LETM1-202ENST00000466175 CASP4P49662 377 aa20■□□□□ 0.79
LETM1-202ENST00000466175 SMAP1Q8IYB5 467 aaPredicted RBP20■□□□□ 0.79
LETM1-202ENST00000466175 DAW1Q8N136 415 aa20■□□□□ 0.79
LETM1-202ENST00000466175 PARD6BQ9BYG5 372 aa20■□□□□ 0.79
LETM1-202ENST00000466175 ACAD9Q9H845 621 aa20■□□□□ 0.79
LETM1-202ENST00000466175 FAM53CQ9NYF3 392 aa20■□□□□ 0.79
LETM1-202ENST00000466175 TSKSQ9UJT2 592 aa20■□□□□ 0.79
LETM1-202ENST00000466175 ZNF214Q9UL59 606 aaPredicted RBP20■□□□□ 0.79
LETM1-202ENST00000466175 AFG3L2Q9Y4W6 797 aa20■□□□□ 0.79
LETM1-202ENST00000466175 NFASCO94856 1347 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 MACROD2A1Z1Q3 448 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 TESPA1A2RU30 521 aaPredicted RBP19.99■□□□□ 0.79
LETM1-202ENST00000466175 CCDC151A5D8V7 595 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 K7ENM7 598 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 MAPK13O15264 365 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 AOC2O75106 756 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 ATP1A1P05023 1023 aaKnown RBP19.99■□□□□ 0.79
LETM1-202ENST00000466175 PRKCIP41743 596 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 MKRN3Q13064 507 aaKnown RBP19.99■□□□□ 0.79
LETM1-202ENST00000466175 OTUD6AQ7L8S5 288 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 HVCN1Q96D96 273 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 INPP4AQ96PE3 977 aaPredicted RBP19.99■□□□□ 0.79
LETM1-202ENST00000466175 NOX5Q96PH1 765 aa19.99■□□□□ 0.79
LETM1-202ENST00000466175 MOV10L1Q9BXT6 1211 aaKnown RBP19.99■□□□□ 0.79
LETM1-202ENST00000466175 GFPT2O94808 682 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 ZRANB2O95218 330 aaKnown RBP eCLIP19.98■□□□□ 0.79
LETM1-202ENST00000466175 SLC9A1P19634 815 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 RFX1P22670 979 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 MCM3P25205 808 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 IREB2P48200 963 aaKnown RBP19.98■□□□□ 0.79
LETM1-202ENST00000466175 GFPT1Q06210 699 aaPredicted RBP19.98■□□□□ 0.79
LETM1-202ENST00000466175 VPS36Q86VN1 386 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.98■□□□□ 0.79
LETM1-202ENST00000466175 HNRNPLLQ8WVV9 542 aaKnown RBP19.98■□□□□ 0.79
LETM1-202ENST00000466175 VTI1AQ96AJ9 217 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 ZIC5Q96T25 663 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 POLD4Q9HCU8 107 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 GCNT4Q9P109 453 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 RAB21Q9UL25 225 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 RIPK3Q9Y572 518 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 PCDHA10Q9Y5I2 948 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 BTNL10A8MVZ5 291 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 N4BP1O75113 896 aaKnown RBP19.98■□□□□ 0.79
LETM1-202ENST00000466175 ERLIN1O75477 346 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 GTF2BQ00403 316 aa19.98■□□□□ 0.79
LETM1-202ENST00000466175 LDLRAD1Q5T700 205 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms