RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 ISCA1Q9BUE6 129 aa8.22□□□□□ -1.09
SPTA1-203ENST00000465741 PRDM7Q9NQW5 492 aa8.22□□□□□ -1.09
SPTA1-203ENST00000465741 CWC25Q9NXE8 425 aaPredicted RBP8.22□□□□□ -1.09
SPTA1-203ENST00000465741 COL4A3BPQ9Y5P4 624 aa8.22□□□□□ -1.09
SPTA1-203ENST00000465741 SHANK3Q9BYB0 1731 aa8.21□□□□□ -1.09
SPTA1-203ENST00000465741 SCN11AQ9UI33 1791 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 hCG_2014768A0A024R1R8 64 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 A0A087X0B3 334 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 FAM47E-STBD1D6RA91 191 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 GSTA4O15217 222 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 NRDCO43847 1150 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 POU3F2P20265 443 aaPredicted RBP8.21□□□□□ -1.1
SPTA1-203ENST00000465741 HMGB2P26583 209 aaKnown RBP8.21□□□□□ -1.1
SPTA1-203ENST00000465741 CNGA1P29973 690 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 STAT3P40763 770 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 NR0B2Q15466 257 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 HSP90AB3PQ58FF7 597 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 FAM47CQ5HY64 1035 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 CT47A1Q5JQC4 288 aaPredicted RBP8.21□□□□□ -1.1
SPTA1-203ENST00000465741 CEP85Q6P2H3 762 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 CENPQQ7L2Z9 268 aaPredicted RBP8.21□□□□□ -1.1
SPTA1-203ENST00000465741 LILRA2Q8N149 483 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 ANKRD44Q8N8A2 993 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 CCDC191Q8NCU4 936 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 DDX1Q92499 740 aaKnown RBP8.21□□□□□ -1.1
SPTA1-203ENST00000465741 TMEM169Q96HH4 297 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 SUCLG2Q96I99 432 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 CAMKK2Q96RR4 588 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 TARS2Q9BW92 718 aaKnown RBP8.21□□□□□ -1.1
SPTA1-203ENST00000465741 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.21□□□□□ -1.1
SPTA1-203ENST00000465741 EBF1Q9UH73 591 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 SRP68Q9UHB9 627 aaKnown RBP8.21□□□□□ -1.1
SPTA1-203ENST00000465741 HDAC5Q9UQL6 1122 aa8.21□□□□□ -1.1
SPTA1-203ENST00000465741 GSG1L2A8MUP6 293 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 SOD2P04179 222 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 RFC4P35249 363 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 BCL6P41182 706 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 NEK4P51957 841 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 EZH2Q15910 746 aaKnown RBP8.2□□□□□ -1.1
SPTA1-203ENST00000465741 ZCCHC8Q6NZY4 707 aaKnown RBP8.2□□□□□ -1.1
SPTA1-203ENST00000465741 UBE3BQ7Z3V4 1068 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 PPP1R42Q7Z4L9 355 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 NLRP10Q86W26 655 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 ZNF34Q8IZ26 560 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 ASIC4Q96FT7 647 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 CLDND1Q9NY35 253 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 TFCP2L1Q9NZI6 479 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 MARCH2Q9P0N8 246 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 GULP1Q9UBP9 304 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 NARFQ9UHQ1 456 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 COA3Q9Y2R0 106 aaPredicted RBP8.2□□□□□ -1.1
SPTA1-203ENST00000465741 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
SPTA1-203ENST00000465741 UTYO14607 1347 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 TOGARAM1Q9Y4F4 1720 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 KAT6BQ8WYB5 2073 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 KDM3BQ7LBC6 1761 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 ATP10DQ9P241 1426 aa8.2□□□□□ -1.1
SPTA1-203ENST00000465741 A0A1W2PQJ5 194 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 HMMRO75330 724 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 HPXP02790 462 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 JMJD7P0C870 316 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 ANAPC15P60006 121 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 ST5P78524 1137 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 ZNF460Q14592 562 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 CFAP100Q494V2 611 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 EPHA10Q5JZY3 1008 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 SUSD4Q5VX71 490 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 OGFOD2Q6N063 350 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 CLEC4GQ6UXB4 293 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 CEP68Q76N32 757 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 Q8N1Y9 231 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 SYNE4Q8N205 404 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 NUP43Q8NFH3 380 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 FBXW5Q969U6 566 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 FAM89AQ96GI7 184 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 TRMT2BQ96GJ1 504 aaKnown RBP8.19□□□□□ -1.1
SPTA1-203ENST00000465741 KAZALD1Q96I82 304 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 UTP14AQ9BVJ6 771 aaKnown RBP8.19□□□□□ -1.1
SPTA1-203ENST00000465741 PCDH12Q9NPG4 1184 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 IMPACTQ9P2X3 320 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 TRMT112Q9UI30 125 aaKnown RBP8.19□□□□□ -1.1
SPTA1-203ENST00000465741 NIP7Q9Y221 180 aaKnown RBP eCLIP8.19□□□□□ -1.1
SPTA1-203ENST00000465741 ZNF652Q9Y2D9 606 aa8.19□□□□□ -1.1
SPTA1-203ENST00000465741 PNMA6EA0A0J9YXQ4 647 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 WNT9AO14904 365 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 SRGAP3O43295 1099 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 PCCAP05165 728 aaPredicted RBP8.18□□□□□ -1.1
SPTA1-203ENST00000465741 IGBP1P78318 339 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 R3HDM1Q15032 1099 aaKnown RBP8.18□□□□□ -1.1
SPTA1-203ENST00000465741 SNX17Q15036 470 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 ZNF827Q17R98 1081 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 ZNF792Q3KQV3 632 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 LCE4AQ5TA78 99 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 ANKRD45Q5TZF3 282 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 RNF180Q86T96 592 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 CABP7Q86V35 215 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 SKAP1Q86WV1 359 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 LZTR1Q8N653 840 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 PCDH19Q8TAB3 1148 aa8.18□□□□□ -1.1
SPTA1-203ENST00000465741 USP33Q8TEY7 942 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms