RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PODXLO00592 558 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 RARAP10276 462 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 NCALDP61601 193 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 BZW1Q7L1Q6 419 aaKnown RBP21.36■■□□□ 1.01
SDF4-205ENST00000465727 SLC35G2Q8TBE7 412 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 WDR66Q8TBY9 1149 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 FBXO25Q8TCJ0 367 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 THOC1Q96FV9 657 aaKnown RBP21.36■■□□□ 1.01
SDF4-205ENST00000465727 ABCF3Q9NUQ8 709 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 KIAA1024Q9UPX6 916 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 NR2E1Q9Y466 385 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 MYH14Q7Z406 1995 aaKnown RBP21.36■■□□□ 1.01
SDF4-205ENST00000465727 SYNGAP1Q96PV0 1343 aa21.36■■□□□ 1.01
SDF4-205ENST00000465727 DDX60LQ5H9U9 1706 aaKnown RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 SUN1O94901 812 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 CHRNA3P32297 505 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 CDK8P49336 464 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 RPS8P62241 208 aaKnown RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 GRIK3Q13003 919 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 CNGA2Q16280 664 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 ASPRV1Q53RT3 343 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 DNAAF5Q86Y56 855 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 TGFBRAP1Q8WUH2 860 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 CTNNBL1Q8WYA6 563 aaPredicted RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 ANKRD27Q96NW4 1050 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 ROPN1BQ9BZX4 212 aaPredicted RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 ROPN1Q9HAT0 212 aaPredicted RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 AGAP1Q9UPQ3 857 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 UBOX5O94941 541 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 KRT18P05783 430 aaKnown RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 RPL13P26373 211 aaKnown RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 CLK2P49760 499 aaKnown RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 IFI35P80217 286 aaPredicted RBP21.35■■□□□ 1.01
SDF4-205ENST00000465727 RUNDC3BQ96NL0 473 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 GCNT4Q9P109 453 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 PPP1R9AQ9ULJ8 1098 aa21.35■■□□□ 1.01
SDF4-205ENST00000465727 PHF2O75151 1096 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 LDHCP07864 332 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 BNIP1Q12981 228 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 PRPF4BQ13523 1007 aaKnown RBP21.34■■□□□ 1.01
SDF4-205ENST00000465727 COA7Q96BR5 231 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 UBA5Q9GZZ9 404 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 ECT2Q9H8V3 914 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 OSGEPQ9NPF4 335 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 GRHL1Q9NZI5 618 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 PCYOX1Q9UHG3 505 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 L3MBTL1Q9Y468 752 aa21.34■■□□□ 1.01
SDF4-205ENST00000465727 CDK5RAP2Q96SN8 1893 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 RASGRF2O14827 1237 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 COPS2P61201 443 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 ICA1Q05084 483 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 DCAF17Q5H9S7 520 aaPredicted RBP21.33■■□□□ 1.01
SDF4-205ENST00000465727 SLC10A5Q5PT55 438 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 EPM2AIP1Q7L775 607 aaPredicted RBP21.33■■□□□ 1.01
SDF4-205ENST00000465727 ARMC2Q8NEN0 867 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 LNX1Q8TBB1 728 aaPredicted RBP21.33■■□□□ 1.01
SDF4-205ENST00000465727 CNKSR1Q969H4 720 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 CEP95Q96GE4 821 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 TAOK3Q9H2K8 898 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 SNX24Q9Y343 169 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 ARFGEF1Q9Y6D6 1849 aa21.33■■□□□ 1.01
SDF4-205ENST00000465727 USP17L5A8MUK1 530 aa21.33■■□□□ 1
SDF4-205ENST00000465727 ECM2O94769 699 aaPredicted RBP21.33■■□□□ 1
SDF4-205ENST00000465727 RARGP13631 454 aa21.33■■□□□ 1
SDF4-205ENST00000465727 ALDH5A1P51649 535 aaPredicted RBP21.33■■□□□ 1
SDF4-205ENST00000465727 SLC12A3P55017 1021 aa21.33■■□□□ 1
SDF4-205ENST00000465727 GLG1Q92896 1179 aa21.33■■□□□ 1
SDF4-205ENST00000465727 SLC35C1Q96A29 364 aa21.33■■□□□ 1
SDF4-205ENST00000465727 ACSBG1Q96GR2 724 aa21.33■■□□□ 1
SDF4-205ENST00000465727 ERVK-5Q9HDB9 667 aa21.33■■□□□ 1
SDF4-205ENST00000465727 ARHGEF3Q9NR81 526 aa21.33■■□□□ 1
SDF4-205ENST00000465727 TYW1Q9NV66 732 aaKnown RBP21.33■■□□□ 1
SDF4-205ENST00000465727 NPHP3-ACAD11A0A0J9YXS1 232 aa21.32■■□□□ 1
SDF4-205ENST00000465727 MIF4GDA9UHW6 222 aaKnown RBP21.32■■□□□ 1
SDF4-205ENST00000465727 EVI5O60447 810 aa21.32■■□□□ 1
SDF4-205ENST00000465727 LUC7L3O95232 432 aaKnown RBP21.32■■□□□ 1
SDF4-205ENST00000465727 GGPS1O95749 300 aa21.32■■□□□ 1
SDF4-205ENST00000465727 VCAM1P19320 739 aa21.32■■□□□ 1
SDF4-205ENST00000465727 SOX5P35711 763 aa21.32■■□□□ 1
SDF4-205ENST00000465727 PTGIRP43119 386 aa21.32■■□□□ 1
SDF4-205ENST00000465727 CCNG1P51959 295 aa21.32■■□□□ 1
SDF4-205ENST00000465727 HADHBP55084 474 aaKnown RBP21.32■■□□□ 1
SDF4-205ENST00000465727 KCNJ2P63252 427 aa21.32■■□□□ 1
SDF4-205ENST00000465727 C11orf91Q3C1V1 193 aa21.32■■□□□ 1
SDF4-205ENST00000465727 TBC1D16Q8TBP0 767 aa21.32■■□□□ 1
SDF4-205ENST00000465727 KLHL29Q96CT2 875 aa21.32■■□□□ 1
SDF4-205ENST00000465727 DHX36Q9H2U1 1008 aaKnown RBP21.32■■□□□ 1
SDF4-205ENST00000465727 SEMA4AQ9H3S1 761 aa21.32■■□□□ 1
SDF4-205ENST00000465727 POTEB3A0JP26 581 aa21.32■■□□□ 1
SDF4-205ENST00000465727 POTECB2RU33 542 aa21.32■■□□□ 1
SDF4-205ENST00000465727 RIPK2O43353 540 aa21.32■■□□□ 1
SDF4-205ENST00000465727 AKAP3O75969 853 aa21.32■■□□□ 1
SDF4-205ENST00000465727 ATP5DP30049 168 aa21.32■■□□□ 1
SDF4-205ENST00000465727 CACNB1Q02641 598 aaPredicted RBP21.32■■□□□ 1
SDF4-205ENST00000465727 LMNB2Q03252 620 aa21.32■■□□□ 1
SDF4-205ENST00000465727 AUHQ13825 339 aaKnown RBP21.32■■□□□ 1
SDF4-205ENST00000465727 BMT2Q1RMZ1 405 aa21.32■■□□□ 1
SDF4-205ENST00000465727 ARSHQ5FYA8 562 aa21.32■■□□□ 1
SDF4-205ENST00000465727 POTEBQ6S5H4 581 aa21.32■■□□□ 1
SDF4-205ENST00000465727 OLIG1Q8TAK6 271 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms