RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 CATSPERGQ6ZRH7 1159 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 MIER3Q7Z3K6 550 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 CNGA4Q8IV77 575 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 BANK1Q8NDB2 785 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 SCFD1Q8WVM8 642 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 PRIMPOLQ96LW4 560 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 NOC4LQ9BVI4 516 aaKnown RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 JADE2Q9NQC1 790 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 PDLIM7Q9NR12 457 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 PXMP2Q9NR77 195 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 KCNH7Q9NS40 1196 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 WRAP73Q9P2S5 460 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 KCNH4Q9UQ05 1017 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 AFG3L2Q9Y4W6 797 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 PLXNA1Q9UIW2 1896 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 FASNP49327 2511 aaKnown RBP9.15□□□□□ -0.94
UBE4B-205ENST00000465408 A0A1W2PQC6 194 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 STX10O60499 249 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 PEX10O60683 326 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 PRPF6O94906 941 aaKnown RBP9.15□□□□□ -0.94
UBE4B-205ENST00000465408 FAM13AO94988 1023 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 FGFR1OPO95684 399 aaKnown RBP9.15□□□□□ -0.94
UBE4B-205ENST00000465408 FDX1P10109 184 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 ERCC3P19447 782 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 KRT9P35527 623 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 ID4P47928 161 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 DNM2P50570 870 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 PPATQ06203 517 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 TBC1D8BQ0IIM8 1120 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 TRIM14Q14142 442 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 PLS1Q14651 629 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 COG2Q14746 738 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 TMEM132BQ14DG7 1078 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 CCDC40Q4G0X9 1142 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 VWA3BQ502W6 1294 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 TREML2Q5T2D2 321 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 ARHGEF16Q5VV41 709 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 RINT1Q6NUQ1 792 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 HFE2Q6ZVN8 426 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 NIPA1Q7RTP0 329 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 REXO1L1PQ8IX06 675 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 MYRIPQ8NFW9 859 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 TSC1Q92574 1164 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 CCDC51Q96ER9 411 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 RMDN3Q96TC7 470 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 RIT2Q99578 217 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 PDCD2LQ9BRP1 358 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 LXNQ9BS40 222 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 ABHD10Q9NUJ1 306 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 FAM86C1Q9NVL1 165 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 PNMA2Q9UL42 364 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 ZNF214Q9UL59 606 aaPredicted RBP9.15□□□□□ -0.94
UBE4B-205ENST00000465408 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 SMCHD1A6NHR9 2005 aa9.15□□□□□ -0.94
UBE4B-205ENST00000465408 TRIOO75962 3097 aa9.15□□□□□ -0.95
UBE4B-205ENST00000465408 RIF1Q5UIP0 2472 aaKnown RBP9.14□□□□□ -0.95
UBE4B-205ENST00000465408 DNAH14Q0VDD8 3507 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 TTC26A0AVF1 554 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 SPDYE16A6NNV3 312 aaPredicted RBP9.14□□□□□ -0.95
UBE4B-205ENST00000465408 SFI1A8K8P3 1242 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 DHX15O43143 795 aaKnown RBP9.14□□□□□ -0.95
UBE4B-205ENST00000465408 CCP110O43303 1012 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 ZSCAN12O43309 604 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 CCND2P30279 289 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 CCND3P30281 292 aaPredicted RBP9.14□□□□□ -0.95
UBE4B-205ENST00000465408 OAZ1P54368 228 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 PTPN5P54829 565 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 ERVK-24P63145 666 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 MTMR1Q13613 665 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 MAN2A1Q16706 1144 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 SH3D19Q5HYK7 790 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 FKBP15Q5T1M5 1219 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 SYT10Q6XYQ8 523 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 GADL1Q6ZQY3 521 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 EPM2AIP1Q7L775 607 aaPredicted RBP9.14□□□□□ -0.95
UBE4B-205ENST00000465408 HERVK_113Q902F9 699 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 NACC1Q96RE7 527 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 KCTD10Q9H3F6 313 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 MRPL44Q9H9J2 332 aaKnown RBP9.14□□□□□ -0.95
UBE4B-205ENST00000465408 MAP3K20Q9NYL2 800 aaKnown RBP9.14□□□□□ -0.95
UBE4B-205ENST00000465408 GJD2Q9UKL4 321 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 RALYQ9UKM9 306 aaKnown RBP9.14□□□□□ -0.95
UBE4B-205ENST00000465408 ADAMTS5Q9UNA0 930 aa9.14□□□□□ -0.95
UBE4B-205ENST00000465408 FRMPD3Q5JV73 1810 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 PHIPQ8WWQ0 1821 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 A0A0U1RQJ8 604 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 ARHGEF35A5YM69 484 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 KIF2AO00139 706 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-205ENST00000465408 SORBS3O60504 671 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 ATP9AO75110 1047 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 KIF20AO95235 890 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 GCNT3O95395 438 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 ALADP13716 330 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 GAP43P17677 238 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 FECHP22830 423 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 NMT1P30419 496 aaKnown RBP9.13□□□□□ -0.95
UBE4B-205ENST00000465408 HOXD13P35453 343 aa9.13□□□□□ -0.95
UBE4B-205ENST00000465408 FKBP3Q00688 224 aaKnown RBP9.13□□□□□ -0.95
UBE4B-205ENST00000465408 UGCGQ16739 394 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms