RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CNNM4Q6P4Q7 775 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 NFRKBQ6P4R8 1299 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 IGKV6-21A0A0C4DH24 114 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 C22orf31O95567 290 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 POLGP54098 1239 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 ZNF200P98182 395 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 DPYDQ12882 1025 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 EMC2Q15006 297 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 CT47A1Q5JQC4 288 aaPredicted RBP18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 MTHFD1LQ6UB35 978 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 MAEAQ7L5Y9 396 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 SESTD1Q86VW0 696 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 ANKLE1Q8NAG6 615 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 SLC7A3Q8WY07 619 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 REEP2Q9BRK0 252 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 GTF2IRD1Q9UHL9 959 aa18.74■□□□□ 0.59
EXOSC3-203ENST00000465229 MKI67P46013 3256 aaKnown RBP18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 C17orf102A2RUQ5 167 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 MBLAC1A4D2B0 266 aaPredicted RBP18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 BIN1O00499 593 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 SMC2O95347 1197 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 KRT18P05783 430 aaKnown RBP18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 SOX10P56693 466 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 EXOC8Q8IYI6 725 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 DAW1Q8N136 415 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 SLC43A3Q8NBI5 491 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 SMARCE1Q969G3 411 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 ATP6V0A4Q9HBG4 840 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 DACH1Q9UI36 760 aa18.73■□□□□ 0.59
EXOSC3-203ENST00000465229 MAGEB2O15479 319 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 GNAT1P11488 350 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 CAPN2P17655 700 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 MAPK7Q13164 816 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 MKRN4PQ13434 485 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 NCAPHQ15003 741 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 FAM47CQ5HY64 1035 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 GDF6Q6KF10 455 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 MLKLQ8NB16 471 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 MCPH1Q8NEM0 835 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 DIS3LQ8TF46 1054 aaKnown RBP18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 SENP6Q9GZR1 1112 aaPredicted RBP18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 SUGCTQ9HAC7 445 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 GPRC5CQ9NQ84 441 aa18.72■□□□□ 0.59
EXOSC3-203ENST00000465229 A0A0U1RQG5 324 aaPredicted RBP18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 SFI1A8K8P3 1242 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 RSPH10B2B2RC85 870 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 TREHO43280 583 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 HIP1RO75146 1068 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 RSPH10BP0C881 870 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 COL6A1P12109 1028 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 ASIC1P78348 528 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 DRP2Q13474 957 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 MORC3Q14149 939 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 FAM102BQ5T8I3 360 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 EFCAB12Q6NXP0 572 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 LRRC71Q8N4P6 559 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 METTL13Q8N6R0 699 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 LINC01465Q8N7H1 131 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 TMEM143Q96AN5 459 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 JPH2Q9BR39 696 aaPredicted RBP18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 TIPINQ9BVW5 301 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 MAN1B1Q9UKM7 699 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 KAT6AQ92794 2004 aa18.71■□□□□ 0.59
EXOSC3-203ENST00000465229 ARVCFO00192 962 aa18.71■□□□□ 0.58
EXOSC3-203ENST00000465229 KLRC4O43908 158 aa18.71■□□□□ 0.58
EXOSC3-203ENST00000465229 IDEP14735 1019 aa18.71■□□□□ 0.58
EXOSC3-203ENST00000465229 PTPN11Q06124 597 aaPredicted RBP18.71■□□□□ 0.58
EXOSC3-203ENST00000465229 RETREG2Q8NC44 543 aa18.71■□□□□ 0.58
EXOSC3-203ENST00000465229 ODF2LQ9ULJ1 636 aa18.71■□□□□ 0.58
EXOSC3-203ENST00000465229 PCDHA2Q9Y5H9 948 aa18.71■□□□□ 0.58
EXOSC3-203ENST00000465229 PVALEFA0A1B0GWK0 134 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 FRMD3A2A2Y4 597 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 GAS2O43903 313 aaKnown RBP18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 RPN1P04843 607 aaKnown RBP18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 ARL2P36404 184 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 CDK7P50613 346 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 ZNF131P52739 623 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 MYL5Q02045 173 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 UNC13DQ70J99 1090 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 PAWRQ96IZ0 340 aaKnown RBP18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 CTAGE1Q96RT6 745 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 PANK4Q9NVE7 773 aa18.7■□□□□ 0.58
EXOSC3-203ENST00000465229 LOXHD1Q8IVV2 1947 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 EN2P19622 333 aaPredicted RBP18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 CLCN3P51790 818 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 IER5Q5VY09 327 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 RUFY4Q6ZNE9 571 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 KIAA0319LQ8IZA0 1049 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 PRPF31Q8WWY3 499 aaKnown RBP18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 KIFAP3Q92845 792 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 DRC1Q96MC2 740 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 GSDMAQ96QA5 445 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 SEZ6LQ9BYH1 1024 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 ZHX3Q9H4I2 956 aa18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 TRMT13Q9NUP7 481 aaKnown RBP18.69■□□□□ 0.58
EXOSC3-203ENST00000465229 TBCAO75347 108 aaKnown RBP18.68■□□□□ 0.58
EXOSC3-203ENST00000465229 FAM13AO94988 1023 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms