RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CCDC43Q96MW1 224 aaKnown RBP19■□□□□ 0.63
VPS52-215ENST00000464425 GUCD1Q96NT3 240 aa19■□□□□ 0.63
VPS52-215ENST00000464425 DHX33Q9H6R0 707 aaKnown RBP19■□□□□ 0.63
VPS52-215ENST00000464425 ERVK-5Q9HDB9 667 aa19■□□□□ 0.63
VPS52-215ENST00000464425 ANKEF1Q9NU02 776 aa19■□□□□ 0.63
VPS52-215ENST00000464425 ZDHHC9Q9Y397 364 aa19■□□□□ 0.63
VPS52-215ENST00000464425 PPME1Q9Y570 386 aa19■□□□□ 0.63
VPS52-215ENST00000464425 LCHNA4D1U4 455 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 PP2D1A8MPX8 630 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 GPR182O15218 404 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 CSDE1O75534 798 aaKnown RBP18.99■□□□□ 0.63
VPS52-215ENST00000464425 IBSPP21815 317 aaPredicted RBP18.99■□□□□ 0.63
VPS52-215ENST00000464425 RPA1P27694 616 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 CDC25AP30304 524 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 PRPHP41219 470 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 ECM1Q16610 540 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 FAM228AQ86W67 206 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 EXOC8Q8IYI6 725 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 ZNF710Q8N1W2 664 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 IGSF22Q8N9C0 903 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 LINC01599Q8WXQ3 324 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 TOP1MTQ969P6 601 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 NACC1Q96RE7 527 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 CDX2Q99626 313 aaPredicted RBP18.99■□□□□ 0.63
VPS52-215ENST00000464425 RAD9AQ99638 391 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 FTHL17Q9BXU8 183 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 RAB34Q9BZG1 259 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 MICAL3Q7RTP6 2002 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 LOXHD1Q8IVV2 1947 aa18.99■□□□□ 0.63
VPS52-215ENST00000464425 A0A087WZ62 844 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 ARHGEF15O94989 841 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 XRCC6P12956 609 aaKnown RBP eCLIP18.98■□□□□ 0.63
VPS52-215ENST00000464425 FGFR4P22455 802 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 EIF4BP23588 611 aaKnown RBP18.98■□□□□ 0.63
VPS52-215ENST00000464425 RARRES1P49788 294 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 CDC42EP1Q00587 391 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 HAUS3Q68CZ6 603 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 FAM173BQ6P4H8 233 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 SNX29Q8TEQ0 813 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 PRPF31Q8WWY3 499 aaKnown RBP18.98■□□□□ 0.63
VPS52-215ENST00000464425 NLRP4Q96MN2 994 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 MTRQ99707 1265 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 FDXACB1Q9BRP7 624 aaPredicted RBP18.98■□□□□ 0.63
VPS52-215ENST00000464425 CIZ1Q9ULV3 898 aaPredicted RBP18.98■□□□□ 0.63
VPS52-215ENST00000464425 GBF1Q92538 1859 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 PTPRSQ13332 1948 aa18.98■□□□□ 0.63
VPS52-215ENST00000464425 VWA3AA6NCI4 1184 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 MGEA5O60502 916 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 SRGAP2CP0DJJ0 459 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 DARSP14868 501 aaKnown RBP18.97■□□□□ 0.63
VPS52-215ENST00000464425 SF3A1Q15459 793 aaKnown RBP18.97■□□□□ 0.63
VPS52-215ENST00000464425 ODR4Q5SWX8 454 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 ATL3Q6DD88 541 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 PSPC1Q8WXF1 523 aaKnown RBP18.97■□□□□ 0.63
VPS52-215ENST00000464425 GCOM2Q9BZD3 368 aaPredicted RBP18.97■□□□□ 0.63
VPS52-215ENST00000464425 TSPYL2Q9H2G4 693 aaPredicted RBP18.97■□□□□ 0.63
VPS52-215ENST00000464425 CERS4Q9HA82 394 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 XPNPEP1Q9NQW7 623 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 KIAA1024Q9UPX6 916 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 COL4A3BPQ9Y5P4 624 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 CDH23Q9H251 3354 aa18.97■□□□□ 0.63
VPS52-215ENST00000464425 MYO9BQ13459 2157 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 DENND3A2RUS2 1198 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 USO1O60763 962 aaKnown RBP18.96■□□□□ 0.63
VPS52-215ENST00000464425 DGAT1O75907 488 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 BMP15O95972 392 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 TAP1Q03518 808 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 ZRSR1Q15695 479 aaKnown RBP18.96■□□□□ 0.63
VPS52-215ENST00000464425 KRT79Q5XKE5 535 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 MAEAQ7L5Y9 396 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 TCP11Q8WWU5 503 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 MYLIPQ8WY64 445 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 YME1L1Q96TA2 773 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 ADAM2Q99965 735 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 PRDM12Q9H4Q4 367 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 ATP6V0A4Q9HBG4 840 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 DBR1Q9UK59 544 aaKnown RBP18.96■□□□□ 0.63
VPS52-215ENST00000464425 INSL6Q9Y581 213 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 ATP6V1DQ9Y5K8 247 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 CLIC4Q9Y696 253 aa18.96■□□□□ 0.63
VPS52-215ENST00000464425 CEBPZQ03701 1054 aaKnown RBP18.95■□□□□ 0.62
VPS52-215ENST00000464425 LAMTOR4Q0VGL1 99 aa18.95■□□□□ 0.62
VPS52-215ENST00000464425 FOXD4L5Q5VV16 416 aaPredicted RBP18.95■□□□□ 0.62
VPS52-215ENST00000464425 ARL6IP4Q66PJ3 421 aaKnown RBP18.95■□□□□ 0.62
VPS52-215ENST00000464425 SPRED2Q7Z698 418 aa18.95■□□□□ 0.62
VPS52-215ENST00000464425 ZNF410Q86VK4 478 aa18.95■□□□□ 0.62
VPS52-215ENST00000464425 FOXD4L4Q8WXT5 416 aaPredicted RBP18.95■□□□□ 0.62
VPS52-215ENST00000464425 ZNF396Q96N95 335 aaPredicted RBP18.95■□□□□ 0.62
VPS52-215ENST00000464425 DDX19AQ9NUU7 478 aaKnown RBP18.95■□□□□ 0.62
VPS52-215ENST00000464425 STK24Q9Y6E0 443 aa18.95■□□□□ 0.62
VPS52-215ENST00000464425 ARHGEF35A5YM69 484 aa18.94■□□□□ 0.62
VPS52-215ENST00000464425 GAS2O43903 313 aaKnown RBP18.94■□□□□ 0.62
VPS52-215ENST00000464425 MUTP22033 750 aa18.94■□□□□ 0.62
VPS52-215ENST00000464425 HTRA4P83105 476 aaPredicted RBP18.94■□□□□ 0.62
VPS52-215ENST00000464425 PADI6Q6TGC4 694 aa18.94■□□□□ 0.62
VPS52-215ENST00000464425 RNF149Q8NC42 400 aa18.94■□□□□ 0.62
VPS52-215ENST00000464425 MMTAG2Q9BU76 263 aaKnown RBP18.94■□□□□ 0.62
VPS52-215ENST00000464425 IFT122Q9HBG6 1241 aa18.94■□□□□ 0.62
VPS52-215ENST00000464425 MORC2Q9Y6X9 1032 aaPredicted RBP18.94■□□□□ 0.62
VPS52-215ENST00000464425 ASAP2O43150 1006 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms