RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MPHOSPH6Q99547 160 aaKnown RBP9.77□□□□□ -0.84
HPS4-208ENST00000464362 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.77□□□□□ -0.84
HPS4-208ENST00000464362 MAD2L2Q9UI95 211 aa9.77□□□□□ -0.84
HPS4-208ENST00000464362 I3L4J1 428 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 EVI5O60447 810 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 KRT1P04264 644 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 GBP1P32455 592 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 YARSP54577 528 aaKnown RBP9.77□□□□□ -0.85
HPS4-208ENST00000464362 RWDD2BP57060 319 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 EPC2Q52LR7 807 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 CFAP61Q8NHU2 1237 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 GRK7Q8WTQ7 553 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 N4BP2L2Q92802 583 aaPredicted RBP9.77□□□□□ -0.85
HPS4-208ENST00000464362 CCT8L2Q96SF2 557 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 TRIM6Q9C030 488 aaPredicted RBP9.77□□□□□ -0.85
HPS4-208ENST00000464362 RAVER2Q9HCJ3 691 aaKnown RBP9.77□□□□□ -0.85
HPS4-208ENST00000464362 SETD1AO15047 1707 aaKnown RBP9.77□□□□□ -0.85
HPS4-208ENST00000464362 CIB2O75838 187 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 MARK3P27448 753 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 PPP2R2AP63151 447 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 AOC3Q16853 763 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 GNPTABQ3T906 1256 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 RSRC2Q7L4I2 434 aaKnown RBP9.77□□□□□ -0.85
HPS4-208ENST00000464362 TRAPPC11Q7Z392 1133 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 XXYLT1Q8NBI6 393 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 MDM1Q8TC05 714 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 SEMA6BQ9H3T3 888 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 KLHL11Q9NVR0 708 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 PNMA2Q9UL42 364 aa9.77□□□□□ -0.85
HPS4-208ENST00000464362 IPO5O00410 1097 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 STAM2O75886 525 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 RNF8O76064 485 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SRGAP2CP0DJJ0 459 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SLURP2P0DP57 97 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 GEN1Q17RS7 908 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 TSNAXIP1Q2TAA8 658 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SYCP2LQ5T4T6 812 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 INTS5Q6P9B9 1019 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 KCNV2Q8TDN2 545 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 RNF34Q969K3 372 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 FAM213AQ9BRX8 229 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 LXNQ9BS40 222 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 DNAI2Q9GZS0 605 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 TARSL2A2RTX5 802 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 CYP26A1O43174 497 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SARSP49591 514 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 IL9RQ01113 521 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 GRB10Q13322 594 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 KRT81Q14533 505 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 MCTP2Q6DN12 878 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SEPT12Q8IYM1 358 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SLC7A3Q8WY07 619 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 VTI1AQ96AJ9 217 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 NUDT12Q9BQG2 462 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 INTS2Q9H0H0 1204 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 QTRT2Q9H974 415 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 JMJD4Q9H9V9 463 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 STK32BQ9NY57 414 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 CASP4P49662 377 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 PMS2P54278 862 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 C2CD6Q53TS8 623 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 CCDC137Q6PK04 289 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 CYFIP1Q7L576 1253 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SESTD1Q86VW0 696 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 NCAPG2Q86XI2 1143 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 THNSL1Q8IYQ7 743 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 GLIS3Q8NEA6 775 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SREK1Q8WXA9 508 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 MTMR8Q96EF0 704 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 APOL6Q9BWW8 343 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 ZWILCHQ9H900 591 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 RNF225M0QZC1 329 aaPredicted RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 EIF3HO15372 352 aaKnown RBP eCLIP9.76□□□□□ -0.858e-6■□□□□ 10.6
HPS4-208ENST00000464362 LSP1P33241 339 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 GPC5P78333 572 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 CDO1Q16878 200 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 LRRC31Q6UY01 552 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 TRIM59Q8IWR1 403 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SLC35G2Q8TBE7 412 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 TBC1D16Q8TBP0 767 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 ANKS1AQ92625 1134 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 NUP85Q9BW27 656 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 TMEM206Q9H813 350 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 EFCC1Q9HA90 598 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SAYSD1Q9NPB0 183 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 SEPT10Q9P0V9 454 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 LCMT1Q9UIC8 334 aa9.76□□□□□ -0.85
HPS4-208ENST00000464362 DBR1Q9UK59 544 aaKnown RBP9.76□□□□□ -0.85
HPS4-208ENST00000464362 KIF20BQ96Q89 1820 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 PI4K2BG5E9Z4 385 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 NDUFB10O96000 172 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 RCSD1Q6JBY9 416 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 TMEM270Q6UE05 265 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 MCF2L2Q86YR7 1114 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 RHOT2Q8IXI1 618 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 ZNF564Q8TBZ8 553 aaPredicted RBP9.75□□□□□ -0.85
HPS4-208ENST00000464362 P3H4Q92791 437 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 HVCN1Q96D96 273 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms