RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 KIAA1024Q9UPX6 916 aa29.14■■■□□ 2.26
SURF1-203ENST00000463965 ARHGEF35A5YM69 484 aa29.13■■■□□ 2.25
SURF1-203ENST00000463965 ZNF668Q96K58 619 aaPredicted RBP29.13■■■□□ 2.25
SURF1-203ENST00000463965 AK8Q96MA6 479 aa29.13■■■□□ 2.25
SURF1-203ENST00000463965 SLC28A3Q9HAS3 691 aa29.13■■■□□ 2.25
SURF1-203ENST00000463965 ERVK-5Q9HDB9 667 aa29.13■■■□□ 2.25
SURF1-203ENST00000463965 COL4A3BPQ9Y5P4 624 aa29.13■■■□□ 2.25
SURF1-203ENST00000463965 SIP14410 1827 aa29.13■■■□□ 2.25
SURF1-203ENST00000463965 A0A087WWV3 80 aa29.12■■■□□ 2.25
SURF1-203ENST00000463965 ENPP3O14638 875 aa29.12■■■□□ 2.25
SURF1-203ENST00000463965 GJB5O95377 273 aa29.12■■■□□ 2.25
SURF1-203ENST00000463965 DARSP14868 501 aaKnown RBP29.12■■■□□ 2.25
SURF1-203ENST00000463965 PRPF31Q8WWY3 499 aaKnown RBP29.12■■■□□ 2.25
SURF1-203ENST00000463965 NLRP4Q96MN2 994 aa29.12■■■□□ 2.25
SURF1-203ENST00000463965 DDX19AQ9NUU7 478 aaKnown RBP29.12■■■□□ 2.25
SURF1-203ENST00000463965 DNM3Q9UQ16 869 aa29.12■■■□□ 2.25
SURF1-203ENST00000463965 CLIC4Q9Y696 253 aa29.12■■■□□ 2.25
SURF1-203ENST00000463965 MICAL3Q7RTP6 2002 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 A0A087WZ62 844 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.11■■■□□ 2.25
SURF1-203ENST00000463965 PP2D1A8MPX8 630 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 USO1O60763 962 aaKnown RBP29.11■■■□□ 2.25
SURF1-203ENST00000463965 ZSCAN22P10073 491 aaPredicted RBP29.11■■■□□ 2.25
SURF1-203ENST00000463965 MXD4Q14582 209 aaPredicted RBP29.11■■■□□ 2.25
SURF1-203ENST00000463965 FAM173BQ6P4H8 233 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 FAM228AQ86W67 206 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 MCPH1Q8NEM0 835 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 CDK5RAP3Q96JB5 506 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 ZNF396Q96N95 335 aaPredicted RBP29.11■■■□□ 2.25
SURF1-203ENST00000463965 RAD9AQ99638 391 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 FDXACB1Q9BRP7 624 aaPredicted RBP29.11■■■□□ 2.25
SURF1-203ENST00000463965 NKX2-4Q9H2Z4 354 aa29.11■■■□□ 2.25
SURF1-203ENST00000463965 RNF216Q9NWF9 866 aaPredicted RBP29.11■■■□□ 2.25
SURF1-203ENST00000463965 DENND3A2RUS2 1198 aa29.1■■■□□ 2.25
SURF1-203ENST00000463965 CDC25AP30304 524 aa29.1■■■□□ 2.25
SURF1-203ENST00000463965 LONP1P36776 959 aaKnown RBP29.1■■■□□ 2.25
SURF1-203ENST00000463965 LAMTOR4Q0VGL1 99 aa29.1■■■□□ 2.25
SURF1-203ENST00000463965 ZRSR1Q15695 479 aaKnown RBP29.1■■■□□ 2.25
SURF1-203ENST00000463965 ECM1Q16610 540 aa29.1■■■□□ 2.25
SURF1-203ENST00000463965 FAM117BQ6P1L5 589 aa29.1■■■□□ 2.25
SURF1-203ENST00000463965 KCTD17Q8N5Z5 321 aa29.1■■■□□ 2.25
SURF1-203ENST00000463965 TOP1MTQ969P6 601 aa29.1■■■□□ 2.25
SURF1-203ENST00000463965 NT5C3AQ9H0P0 336 aa29.1■■■□□ 2.25
SURF1-203ENST00000463965 TSPYL2Q9H2G4 693 aaPredicted RBP29.1■■■□□ 2.25
SURF1-203ENST00000463965 YBX2Q9Y2T7 364 aaKnown RBP29.1■■■□□ 2.25
SURF1-203ENST00000463965 RBAK-RBAKDNI3L0D1 243 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 SLC26A4O43511 780 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 UPP2O95045 317 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 SRGAP2CP0DJJ0 459 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 SFPQP23246 707 aaKnown RBP eCLIP29.09■■■□□ 2.25
SURF1-203ENST00000463965 UBA7P41226 1012 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 CEBPZQ03701 1054 aaKnown RBP29.09■■■□□ 2.25
SURF1-203ENST00000463965 TFDP1Q14186 410 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 FOXD4L5Q5VV16 416 aaPredicted RBP29.09■■■□□ 2.25
SURF1-203ENST00000463965 Q7L0L9 218 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 TMCO2Q7Z6W1 182 aaPredicted RBP29.09■■■□□ 2.25
SURF1-203ENST00000463965 KSR1Q8IVT5 923 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 FOXD4L4Q8WXT5 416 aaPredicted RBP29.09■■■□□ 2.25
SURF1-203ENST00000463965 SEMA6BQ9H3T3 888 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 ZNF576Q9H609 170 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 XPNPEP1Q9NQW7 623 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 INSL6Q9Y581 213 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 LOXHD1Q8IVV2 1947 aa29.09■■■□□ 2.25
SURF1-203ENST00000463965 MYOGP15173 224 aa29.08■■■□□ 2.25
SURF1-203ENST00000463965 ZSCAN20P17040 1043 aaPredicted RBP29.08■■■□□ 2.25
SURF1-203ENST00000463965 PPP2R2DQ66LE6 453 aa29.08■■■□□ 2.25
SURF1-203ENST00000463965 PADI6Q6TGC4 694 aa29.08■■■□□ 2.25
SURF1-203ENST00000463965 FAM161BQ96MY7 647 aa29.08■■■□□ 2.25
SURF1-203ENST00000463965 BHMT2Q9H2M3 363 aa29.08■■■□□ 2.25
SURF1-203ENST00000463965 TMX1Q9H3N1 280 aa29.08■■■□□ 2.25
SURF1-203ENST00000463965 C1orf112Q9NSG2 853 aa29.08■■■□□ 2.25
SURF1-203ENST00000463965 CA3P07451 260 aa29.07■■■□□ 2.24
SURF1-203ENST00000463965 PTPAQ15257 358 aa29.07■■■□□ 2.24
SURF1-203ENST00000463965 CABP7Q86V35 215 aa29.07■■■□□ 2.24
SURF1-203ENST00000463965 CALML4Q96GE6 196 aa29.07■■■□□ 2.24
SURF1-203ENST00000463965 YME1L1Q96TA2 773 aa29.07■■■□□ 2.24
SURF1-203ENST00000463965 ADAM2Q99965 735 aa29.07■■■□□ 2.24
SURF1-203ENST00000463965 MMTAG2Q9BU76 263 aaKnown RBP29.07■■■□□ 2.24
SURF1-203ENST00000463965 EYA4O95677 639 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 F13A1P00488 732 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 STAG3L1P0CL83 205 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 CYP11B2P19099 503 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 MARCKSP29966 332 aaPredicted RBP29.06■■■□□ 2.24
SURF1-203ENST00000463965 PHKA2P46019 1235 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 HYIQ5T013 277 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 MAEAQ7L5Y9 396 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 SRGAP1Q7Z6B7 1085 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 RTN4RL1Q86UN2 441 aaPredicted RBP29.06■■■□□ 2.24
SURF1-203ENST00000463965 RNF149Q8NC42 400 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 USP28Q96RU2 1077 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 POLR3FQ9H1D9 316 aaPredicted RBP29.06■■■□□ 2.24
SURF1-203ENST00000463965 TTYH1Q9H313 450 aaPredicted RBP29.06■■■□□ 2.24
SURF1-203ENST00000463965 ARID2Q68CP9 1835 aa29.06■■■□□ 2.24
SURF1-203ENST00000463965 ARL2P36404 184 aa29.05■■■□□ 2.24
SURF1-203ENST00000463965 FAM102BQ5T8I3 360 aa29.05■■■□□ 2.24
SURF1-203ENST00000463965 RASSF8Q8NHQ8 419 aa29.05■■■□□ 2.24
SURF1-203ENST00000463965 LINC01599Q8WXQ3 324 aa29.05■■■□□ 2.24
SURF1-203ENST00000463965 RGS18Q9NS28 235 aa29.05■■■□□ 2.24
SURF1-203ENST00000463965 MTMR10Q9NXD2 777 aa29.05■■■□□ 2.24
SURF1-203ENST00000463965 LRFN2Q9ULH4 789 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms