RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 SEC24CP53992 1094 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 GALCP54803 685 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 PPP2R2AP63151 447 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 PPATQ06203 517 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 NFIAQ12857 509 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 DRP2Q13474 957 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 SYDE2Q5VT97 1194 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 DCAF12L1Q5VU92 463 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 TCERG1LQ5VWI1 586 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FBXW10Q5XX13 1052 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 APOBEC3HQ6NTF7 200 aaKnown RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 C6orf89Q6UWU4 347 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FBXO11Q86XK2 927 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FAM186BQ8IYM0 893 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 KCTD17Q8N5Z5 321 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 OTUD6BQ8N6M0 293 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 GMCL1P1Q8NEA9 526 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 CCDC26Q8TAB7 109 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 UBLCP1Q8WVY7 318 aaPredicted RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 TEKT1Q969V4 418 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 TLCD1Q96CP7 247 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 CYFIP2Q96F07 1278 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 C8orf37Q96NL8 207 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 EIF2AK1Q9BQI3 630 aaKnown RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 TRIM51Q9BSJ1 452 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 AMNQ9BXJ7 453 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 GPR88Q9GZN0 384 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 INTS2Q9H0H0 1204 aaKnown RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 BCAS3Q9H6U6 928 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 VCPKMTQ9H867 229 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 CNOT8Q9UFF9 292 aaKnown RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 DIS3Q9Y2L1 958 aaKnown RBP8.04□□□□□ -1.12
SREBF2-204ENST00000462539 CAPN7Q9Y6W3 813 aa8.04□□□□□ -1.12
SREBF2-204ENST00000462539 FAM187AA6NFU0 413 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 SPDYE3A6NKU9 549 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 E7EVH7 732 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 POLRMTO00411 1230 aaKnown RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 EML1O00423 815 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 OPLAHO14841 1288 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 TRAPPC3O43617 180 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 BUB1BO60566 1050 aaPredicted RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 RXRBP28702 533 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 PSMC2P35998 433 aaKnown RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 USP8P40818 1118 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 CRKP46108 304 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 FMO5P49326 533 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 PTENP60484 403 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 SNAP25P60880 206 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 MYL7Q01449 175 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 CYP4A11Q02928 519 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 ICA1Q05084 483 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 ACTN3Q08043 901 aaPredicted RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 KCNA1Q09470 495 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 BYSLQ13895 437 aaKnown RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 PLS1Q14651 629 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 KIF22Q14807 665 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 FAM182BQ5T319 152 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 SWT1Q5T5J6 900 aaKnown RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 RINT1Q6NUQ1 792 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 DAAM2Q86T65 1068 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 SIAH1Q8IUQ4 282 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 ZFPM1Q8IX07 1006 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 PROCA1Q8NCQ7 364 aaPredicted RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 ARHGEF26Q96DR7 871 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 CEP89Q96ST8 783 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 STK33Q9BYT3 514 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 CELF4Q9BZC1 486 aaKnown RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 RAB17Q9H0T7 212 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 BHMT2Q9H2M3 363 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 DPH5Q9H2P9 285 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 YY1AP1Q9H869 796 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 ACTR5Q9H9F9 607 aaPredicted RBP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 TUFT1Q9NNX1 390 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 LRRC4BQ9NT99 713 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.03□□□□□ -1.12
SREBF2-204ENST00000462539 AMACRQ9UHK6 382 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 DNAJC12Q9UKB3 198 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 SPATA31A6Q5VVP1 1343 aa8.03□□□□□ -1.12
SREBF2-204ENST00000462539 IGLV3-22A0A075B6J6 115 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 GMNCA6NCL1 334 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 FAM196BA6NMK8 535 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 PPP1R12BO60237 982 aaPredicted RBP8.02□□□□□ -1.13
SREBF2-204ENST00000462539 TRIM37O94972 964 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 NDUFB10O96000 172 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 RFX1P22670 979 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 POLD1P28340 1107 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 NMT1P30419 496 aaKnown RBP8.02□□□□□ -1.13
SREBF2-204ENST00000462539 ZNF131P52739 623 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 HADHBP55084 474 aaKnown RBP8.02□□□□□ -1.13
SREBF2-204ENST00000462539 EIF3BP55884 814 aaKnown RBP8.02□□□□□ -1.13
SREBF2-204ENST00000462539 DHX9Q08211 1270 aaKnown RBP8.02□□□□□ -1.13
SREBF2-204ENST00000462539 DHX34Q14147 1143 aaKnown RBP8.02□□□□□ -1.13
SREBF2-204ENST00000462539 COG2Q14746 738 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 DRAP1Q14919 205 aaPredicted RBP8.02□□□□□ -1.13
SREBF2-204ENST00000462539 TCEAL1Q15170 157 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 PPP2R5AQ15172 486 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 PPP2R5EQ16537 467 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 QPCTQ16769 361 aa8.02□□□□□ -1.13
SREBF2-204ENST00000462539 KRT71Q3SY84 523 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms