RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ALAS1P13196 640 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 SP100P23497 879 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 DNAJB1P25685 340 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 MCM4P33991 863 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 HSPA4P34932 840 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 NT5C2P49902 561 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 MTMR3Q13615 1198 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 TRIM71Q2Q1W2 868 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 PLEKHG4Q58EX7 1191 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 IQCA1Q86XH1 822 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 RGL4Q8IZJ4 473 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 LRRC47Q8N1G4 583 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 DTWD2Q8NBA8 298 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 SUSD6Q92537 303 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 CEP95Q96GE4 821 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 UBAC1Q9BSL1 405 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 USP26Q9BXU7 913 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 IFIH1Q9BYX4 1025 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 SMOC2Q9H3U7 446 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 CYP39A1Q9NYL5 469 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 ZSWIM5Q9P217 1185 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 HDAC6Q9UBN7 1215 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 STX8Q9UNK0 236 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 RWDD3Q9Y3V2 267 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 PCDHGA11Q9Y5H2 935 aa6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 DNMT3AQ9Y6K1 912 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-204ENST00000462198 PLIN4Q96Q06 1357 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 ZFYVE26Q68DK2 2539 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 EMSYQ7Z589 1322 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 ERICH2A1L162 156 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 DCDC2BA2VCK2 349 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 SFI1A8K8P3 1242 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 RSPH10B2B2RC85 870 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 DYNC1I1O14576 645 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 TTLL1O95922 423 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 LINC00271P0C7V0 271 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 RSPH10BP0C881 870 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 TXNP10599 105 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 WEE1P30291 646 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 MMP16P51512 607 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 ZNF200P98182 395 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 MRPL58Q14197 206 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 KRT32Q14532 448 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 TKFCQ3LXA3 575 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 CCDC178Q5BJE1 867 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 MUM1L1Q5H9M0 696 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 NSMFQ6X4W1 530 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 STOX1Q6ZVD7 989 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 NPAS3Q8IXF0 933 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 CCDC105Q8IYK2 499 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 C7orf31Q8N865 590 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 TPCN2Q8NHX9 752 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 SPPL3Q8TCT6 385 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 UBXN4Q92575 508 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 SEPT8Q92599 483 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 KAT2BQ92831 832 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 WNT8BQ93098 351 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 ZNF830Q96NB3 372 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 NEK1Q96PY6 1258 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 ZSCAN10Q96SZ4 725 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 ZKSCAN3Q9BRR0 538 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 ARHGAP9Q9BRR9 750 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 TLE6Q9H808 572 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 UPF2Q9HAU5 1272 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 IL17RBQ9NRM6 502 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 TCP11L1Q9NUJ3 509 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 GEMIN8Q9NWZ8 242 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 MTMR4Q9NYA4 1195 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 NYAP2Q9P242 653 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 CLIP2Q9UDT6 1046 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 ADD3Q9UEY8 706 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 SEPT3Q9UH03 358 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 GTF2IRD1Q9UHL9 959 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 TAF6LQ9Y6J9 622 aa6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 FLNBO75369 2602 aaKnown RBP6.84□□□□□ -1.31
SMARCC1-204ENST00000462198 MYH7BA7E2Y1 1941 aa6.84□□□□□ -1.32
SMARCC1-204ENST00000462198 IGKV6D-41A0A0C4DH26 115 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 TMEM232C9JQI7 657 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 PER2O15055 1255 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 ADRB1P08588 477 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 TOP1P11387 765 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 NPR3P17342 541 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 AOC1P19801 751 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 CASTP20810 708 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 PSMA5P28066 241 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 MCM5P33992 734 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 THPOP40225 353 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 ALDH5A1P51649 535 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 BAATQ14032 418 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 SART3Q15020 963 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 PPP2R5BQ15173 497 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 NAALADL2Q58DX5 795 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 OXLD1Q5BKU9 147 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 CYB5R4Q7L1T6 521 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 CHST3Q7LGC8 479 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 MB21D2Q8IYB1 491 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 ATP8B4Q8TF62 1192 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 AFG1LQ8WV93 481 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 IRF7Q92985 503 aa6.83□□□□□ -1.32
SMARCC1-204ENST00000462198 JAKMIP1Q96N16 626 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms