RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 MRPL44Q9H9J2 332 aaKnown RBP6.42□□□□□ -1.38
CLK1-207ENST00000461981 PAIP2BQ9ULR5 123 aaKnown RBP6.42□□□□□ -1.38
CLK1-207ENST00000461981 MYH4Q9Y623 1939 aa6.42□□□□□ -1.38
CLK1-207ENST00000461981 ARHGAP6O43182 974 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 LDHAP00338 332 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 FAM200BP0CF97 657 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 ATP1A3P13637 1013 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 KIF5BP33176 963 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 GHRHRQ02643 423 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 SF3A3Q12874 501 aaKnown RBP eCLIP6.41□□□□□ -1.387e-7■■■□□ 14.6
CLK1-207ENST00000461981 PICALMQ13492 652 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 KCTD2Q14681 263 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 MAP7D1Q3KQU3 841 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 ZNF569Q5MCW4 686 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 TRIM50Q86XT4 487 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 NECAB1Q8N987 351 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 CCDC148Q8NFR7 591 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 AGAP11Q8TF27 550 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 TGFBRAP1Q8WUH2 860 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 ARL8AQ96BM9 186 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 NDNQ99608 321 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 SCAND2PQ9GZW5 306 aaPredicted RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 UBA5Q9GZZ9 404 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 IRF2BPLQ9H1B7 796 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 PORCNQ9H237 461 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 FANCLQ9NW38 375 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 LIMCH1Q9UPQ0 1083 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 WDR19Q8NEZ3 1342 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 DOCK3Q8IZD9 2030 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 TMEM221A6NGB7 291 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 BACH1O14867 736 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 LIN7AO14910 233 aaPredicted RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 PFKFB2O60825 505 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 ZBED4O75132 1171 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 ACTN1P12814 892 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 STAT6P42226 847 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 DYNC1I2Q13409 638 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 MTF1Q14872 753 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 IMMTQ16891 758 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 P3H1Q32P28 736 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 Q3C1V9 767 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 PI16Q6UXB8 463 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 BTNL9Q6UXG8 535 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 LCA5Q86VQ0 697 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 NLRP14Q86W24 1093 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 TMCO5AQ8N6Q1 288 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 MYCBPAPQ8TBZ2 947 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 LMAN2LQ9H0V9 348 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 EPN3Q9H201 632 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 PPANQ9NQ55 473 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 XPNPEP3Q9NQH7 507 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 PIH1D3Q9NQM4 214 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 ZMYND8Q9ULU4 1186 aaPredicted RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 A0A1W2PQ45 241 aaPredicted RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 A0A1W2PQY0 241 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 STXBP3O00186 592 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 PITPNM1O00562 1244 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 LUC7L3O95232 432 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 SERPINC1P01008 464 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 TOP1P11387 765 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 ADD2P35612 726 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 TIMM10P62072 90 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 DMPKQ09013 629 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 ADAM9Q13443 819 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 TAF11Q15544 211 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 TSR1Q2NL82 804 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 DPCR1Q3MIW9 517 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 HSP90AA4PQ58FG1 418 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 POTEEQ6S8J3 1075 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 CEP128Q6ZU80 1094 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 SMYD1Q8NB12 490 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 SNRNP27Q8WVK2 155 aaKnown RBP6.41□□□□□ -1.38
CLK1-207ENST00000461981 C8orf76Q96K31 380 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 HAUS7Q99871 368 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 WDR37Q9Y2I8 494 aa6.41□□□□□ -1.38
CLK1-207ENST00000461981 COL4A4P53420 1690 aaPredicted RBP6.4□□□□□ -1.38
CLK1-207ENST00000461981 SIP14410 1827 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 KIF5CO60282 957 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 HNRNPCP07910 306 aaKnown RBP eCLIP6.4□□□□□ -1.38
CLK1-207ENST00000461981 FOSL2P15408 326 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 ADKP55263 362 aaKnown RBP6.4□□□□□ -1.38
CLK1-207ENST00000461981 USP46P62068 366 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 IGBP1P78318 339 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 FANCCQ00597 558 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 DRP2Q13474 957 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 COL19A1Q14993 1142 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 SLMAPQ14BN4 828 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 ALX1Q15699 326 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 KIAA0753Q2KHM9 967 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 ZNF394Q53GI3 561 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 NCCRP1Q6ZVX7 275 aaPredicted RBP6.4□□□□□ -1.38
CLK1-207ENST00000461981 CHURC1Q8WUH1 139 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 RSPH1Q8WYR4 309 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 TIFAQ96CG3 184 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 DDX27Q96GQ7 796 aaKnown RBP6.4□□□□□ -1.38
CLK1-207ENST00000461981 RNPC3Q96LT9 517 aaKnown RBP6.4□□□□□ -1.38
CLK1-207ENST00000461981 RMDN2Q96LZ7 410 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 SEC62Q99442 399 aaKnown RBP6.4□□□□□ -1.38
CLK1-207ENST00000461981 SLF1Q9BQI6 1058 aa6.4□□□□□ -1.38
CLK1-207ENST00000461981 TCP11L1Q9NUJ3 509 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms