RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 MAST2Q6P0Q8 1798 aa6.8□□□□□ -1.32
LMBR1-215ENST00000461603 PIEZO1Q92508 2521 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 CYP2B6P20813 491 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 NASPP49321 788 aaPredicted RBP6.79□□□□□ -1.32
LMBR1-215ENST00000461603 PCBP3P57721 371 aaKnown RBP6.79□□□□□ -1.32
LMBR1-215ENST00000461603 FOXO4P98177 505 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 UBE4AQ14139 1066 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 SHHQ15465 462 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 FAM110CQ1W6H9 321 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 CCDC57Q2TAC2 916 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 C9orf50Q5SZB4 431 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 TREML2Q5T2D2 321 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 LMBR1LQ6UX01 489 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 ZSWIM9Q86XI8 627 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 SCYL3Q8IZE3 742 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 TBC1D22AQ8WUA7 517 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 RUNDC1Q96C34 613 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 SHDQ96IW2 340 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 STK31Q9BXU1 1019 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 PRDM14Q9GZV8 571 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 C19orf73Q9NVV2 129 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 IFT57Q9NWB7 429 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 SLAMF8Q9P0V8 285 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.79□□□□□ -1.32
LMBR1-215ENST00000461603 GJD2Q9UKL4 321 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 SLC45A1Q9Y2W3 748 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 AFG3L2Q9Y4W6 797 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 RNF114Q9Y508 228 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 PCDHA11Q9Y5I1 949 aa6.79□□□□□ -1.32
LMBR1-215ENST00000461603 PLXNB2O15031 1838 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 LTBP2Q14767 1821 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 SHISA3A0PJX4 238 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 FITM1A5D6W6 292 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 HPXP02790 462 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 RBM25P49756 843 aaKnown RBP6.78□□□□□ -1.32
LMBR1-215ENST00000461603 GNAI1P63096 354 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 TEKQ02763 1124 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 SNX17Q15036 470 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 EPHA10Q5JZY3 1008 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 MAP3K21Q5TCX8 1036 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 CDC42EP5Q6NZY7 148 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 ANKS4BQ8N8V4 417 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 CPLX3Q8WVH0 158 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 FAM168AQ92567 244 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 TCTN2Q96GX1 697 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 PUS3Q9BZE2 481 aaKnown RBP6.78□□□□□ -1.32
LMBR1-215ENST00000461603 SENP6Q9GZR1 1112 aaPredicted RBP6.78□□□□□ -1.32
LMBR1-215ENST00000461603 CHST7Q9NS84 486 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 AGTPBP1Q9UPW5 1226 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 REV3LO60673 3130 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 PHIPQ8WWQ0 1821 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 DOCK2Q92608 1830 aa6.78□□□□□ -1.32
LMBR1-215ENST00000461603 MAST3O60307 1309 aa6.77□□□□□ -1.32
LMBR1-215ENST00000461603 DOCK1Q14185 1865 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 PEX10O60683 326 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 GSNP06396 782 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 GLI1P08151 1106 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 CCND3P30281 292 aaPredicted RBP6.77□□□□□ -1.33
LMBR1-215ENST00000461603 SMAD3P84022 425 aaKnown RBP6.77□□□□□ -1.33
LMBR1-215ENST00000461603 CACNB2Q08289 660 aaPredicted RBP6.77□□□□□ -1.33
LMBR1-215ENST00000461603 HHIPL2Q6UWX4 724 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 TTC6Q86TZ1 520 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 ZFPM1Q8IX07 1006 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 CCDC144CPQ8IYA2 1237 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 LINS1Q8NG48 757 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 DNAAF4Q8WXU2 420 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 KIRREL1Q96J84 757 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 MRIQ9BWK5 157 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 CHMP4AQ9BY43 222 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 PRDM7Q9NQW5 492 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 ATRNL1Q5VV63 1379 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 CHD9Q3L8U1 2897 aa6.77□□□□□ -1.33
LMBR1-215ENST00000461603 FRMPD3Q5JV73 1810 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 PRAMEF1O95521 474 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 ZGLP1P0C6A0 271 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 ZKSCAN1P17029 563 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 KIR2DL1P43626 348 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 KIR2DL2P43627 348 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 GCLCP48506 637 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 ZNF143P52747 638 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 RTP1P59025 263 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 WDR43Q15061 677 aaKnown RBP eCLIP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 TCEAL1Q15170 157 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 KCNMB1Q16558 191 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 TNNI3KQ59H18 835 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 CAVIN4Q5BKX8 364 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 TMC3Q7Z5M5 1100 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 POU5F2Q8N7G0 328 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 BHLHE22Q8NFJ8 381 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 LINC01599Q8WXQ3 324 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 TSR2Q969E8 191 aaKnown RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 UHRF1Q96T88 793 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 USP40Q9NVE5 1235 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 ATP11BQ9Y2G3 1177 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 LRRFIP2Q9Y608 721 aaKnown RBP6.76□□□□□ -1.33
LMBR1-215ENST00000461603 FHOD1Q9Y613 1164 aa6.76□□□□□ -1.33
LMBR1-215ENST00000461603 MYO9BQ13459 2157 aa6.75□□□□□ -1.33
LMBR1-215ENST00000461603 LOC285556D6RIA3 1793 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms