RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 PSPC1Q8WXF1 523 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 TMEM143Q96AN5 459 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 RAD9AQ99638 391 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 GCOM2Q9BZD3 368 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 ADAMTS10Q9H324 1103 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 SEMA6BQ9H3T3 888 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 ZSCAN16Q9H4T2 348 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 ZNF576Q9H609 170 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 ATP6V0A4Q9HBG4 840 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 ERVK-5Q9HDB9 667 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 DBR1Q9UK59 544 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 ST3GAL5Q9UNP4 418 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 A0A087WZ62 844 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 DENND3A2RUS2 1198 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 ARHGEF35A5YM69 484 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 ASAP2O43150 1006 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 DGAT1O75907 488 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 CA3P07451 260 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 PDIA4P13667 645 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 EIF4BP23588 611 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 SF3A1Q15459 793 aaKnown RBP11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 IL17AQ16552 155 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 PPP2R2DQ66LE6 453 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 FAM43BQ6ZT52 329 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 ZNF410Q86VK4 478 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 FAM228AQ86W67 206 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 TOP1MTQ969P6 601 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 NLRP4Q96MN2 994 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 FDXACB1Q9BRP7 624 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 INO80BQ9C086 356 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 TTYH1Q9H313 450 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 MTMR10Q9NXD2 777 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 KIAA1024Q9UPX6 916 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 INSL6Q9Y581 213 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 COL4A3BPQ9Y5P4 624 aa11.79□□□□□ -0.52
TRAPPC12-213ENST00000461577 PP2D1A8MPX8 630 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 USO1O60763 962 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 SRGAP2CP0DJJ0 459 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 DARSP14868 501 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 ZSCAN20P17040 1043 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 IBSPP21815 317 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 LAMTOR4Q0VGL1 99 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 ZRSR1Q15695 479 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 ECM1Q16610 540 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 KSR1Q8IVT5 923 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 PRPF31Q8WWY3 499 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 CDK5RAP3Q96JB5 506 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 YME1L1Q96TA2 773 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 TMX1Q9H3N1 280 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 C1orf112Q9NSG2 853 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 DDX19AQ9NUU7 478 aaKnown RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 LRFN2Q9ULH4 789 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 CLIC4Q9Y696 253 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 MYH15Q9Y2K3 1946 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 LAMA3Q16787 3333 aa11.78□□□□□ -0.52
TRAPPC12-213ENST00000461577 SLC34A2O95436 690 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 STAG3L1P0CL83 205 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 FGFR4P22455 802 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 SFPQP23246 707 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 CDC25AP30304 524 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 SARSP49591 514 aaKnown RBP11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 TFDP1Q14186 410 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 BECN1Q14457 450 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 MXD4Q14582 209 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 FOXD4L5Q5VV16 416 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 MAEAQ7L5Y9 396 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 MCPH1Q8NEM0 835 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 LINC01599Q8WXQ3 324 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 FOXD4L4Q8WXT5 416 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 AK8Q96MA6 479 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 ADAM2Q99965 735 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 POLR3FQ9H1D9 316 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 XPNPEP1Q9NQW7 623 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 RGS18Q9NS28 235 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 DNM3Q9UQ16 869 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 TTC3P53804 2025 aa11.77□□□□□ -0.53
TRAPPC12-213ENST00000461577 LCHNA4D1U4 455 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 MGEA5O60502 916 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 CSDE1O75534 798 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 ZSCAN22P10073 491 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 ARL2P36404 184 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 LONP1P36776 959 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 UBA7P41226 1012 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 PHKA2P46019 1235 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 HTRA4P83105 476 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 CEBPZQ03701 1054 aaKnown RBP11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 GRIN2CQ14957 1233 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 FAM102BQ5T8I3 360 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 PADI6Q6TGC4 694 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 SRGAP1Q7Z6B7 1085 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 CABP7Q86V35 215 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 RNF149Q8NC42 400 aa11.76□□□□□ -0.53
TRAPPC12-213ENST00000461577 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms