RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 COL9A1P20849 921 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 TMOD1P28289 359 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 IRS1P35568 1242 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 PPP2R5CQ13362 524 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 CAMK1Q14012 370 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 C8orf34Q49A92 452 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 TIGD5Q53EQ6 642 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 PPP4R3AQ6IN85 833 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 FAM177A1Q8N128 213 aaPredicted RBP17.42■□□□□ 0.38
NUP50-213ENST00000461437 KLHL23Q8NBE8 558 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 WASF1Q92558 559 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 C11orf84Q9BUA3 381 aaPredicted RBP17.42■□□□□ 0.38
NUP50-213ENST00000461437 NIFKQ9BYG3 293 aaKnown RBP17.42■□□□□ 0.38
NUP50-213ENST00000461437 NSUN3Q9H649 340 aaKnown RBP17.42■□□□□ 0.38
NUP50-213ENST00000461437 RGL1Q9NZL6 768 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 PLAGL2Q9UPG8 496 aa17.42■□□□□ 0.38
NUP50-213ENST00000461437 A0A087WZ62 844 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 ZBTB39O15060 712 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 MARCH6O60337 910 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 RB1P06400 928 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 IL9P15248 144 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 PSMC5P62195 406 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 CYP4A11Q02928 519 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
NUP50-213ENST00000461437 SPOUT1Q5T280 376 aaKnown RBP17.41■□□□□ 0.38
NUP50-213ENST00000461437 SLC24A5Q71RS6 500 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
NUP50-213ENST00000461437 RNF169Q8NCN4 708 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.41■□□□□ 0.38
NUP50-213ENST00000461437 DYDC2Q96IM9 177 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 FDXACB1Q9BRP7 624 aaPredicted RBP17.41■□□□□ 0.38
NUP50-213ENST00000461437 IGFLR1Q9H665 355 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 RNF19AQ9NV58 838 aa17.41■□□□□ 0.38
NUP50-213ENST00000461437 LINC01565O15544 149 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 MMP1P03956 469 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 DARSP14868 501 aaKnown RBP17.4■□□□□ 0.38
NUP50-213ENST00000461437 GCFC2P16383 781 aaKnown RBP17.4■□□□□ 0.38
NUP50-213ENST00000461437 ATP2B1P20020 1258 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 EIF4BP23588 611 aaKnown RBP17.4■□□□□ 0.38
NUP50-213ENST00000461437 SPIRE1Q08AE8 756 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 CLUL1Q15846 466 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 LONRF3Q496Y0 759 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 ADGRD2Q7Z7M1 963 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 RHPN2Q8IUC4 686 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 FAM20AQ96MK3 541 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 KIF2CQ99661 725 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 LXNQ9BS40 222 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 C1orf112Q9NSG2 853 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 CLDND1Q9NY35 253 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 SUCLA2Q9P2R7 463 aaPredicted RBP17.4■□□□□ 0.38
NUP50-213ENST00000461437 RWDD3Q9Y3V2 267 aa17.4■□□□□ 0.38
NUP50-213ENST00000461437 A0A087WWV3 80 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 IGKV6-21A0A0C4DH24 114 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 PBX3P40426 434 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 QARSP47897 775 aaKnown RBP17.39■□□□□ 0.37
NUP50-213ENST00000461437 DLX2Q07687 328 aaPredicted RBP17.39■□□□□ 0.37
NUP50-213ENST00000461437 HYAL1Q12794 435 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 ODR4Q5SWX8 454 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 SPPL3Q8TCT6 385 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 POF1BQ8WVV4 589 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 KHSRPQ92945 711 aaKnown RBP eCLIP17.39■□□□□ 0.37
NUP50-213ENST00000461437 TMEM143Q96AN5 459 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 NLRP4Q96MN2 994 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 ATP6V0A4Q9HBG4 840 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 BRMS1Q9HCU9 246 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 CD320Q9NPF0 282 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 CYP26B1Q9NR63 512 aa17.39■□□□□ 0.37
NUP50-213ENST00000461437 TYW1Q9NV66 732 aaKnown RBP17.39■□□□□ 0.37
NUP50-213ENST00000461437 MAFO75444 373 aaPredicted RBP17.38■□□□□ 0.37
NUP50-213ENST00000461437 EPHA7Q15375 998 aa17.38■□□□□ 0.37
NUP50-213ENST00000461437 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
NUP50-213ENST00000461437 ECHDC2Q86YB7 292 aa17.38■□□□□ 0.37
NUP50-213ENST00000461437 CEP170P1Q96L14 293 aa17.38■□□□□ 0.37
NUP50-213ENST00000461437 CWH43Q9H720 699 aa17.38■□□□□ 0.37
NUP50-213ENST00000461437 TMEM161AQ9NX61 479 aa17.38■□□□□ 0.37
NUP50-213ENST00000461437 BDP1A6H8Y1 2624 aa17.38■□□□□ 0.37
NUP50-213ENST00000461437 C5orf42Q9H799 3197 aa17.38■□□□□ 0.37
NUP50-213ENST00000461437 TBX3O15119 743 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 P4HBP07237 508 aaKnown RBP17.37■□□□□ 0.37
NUP50-213ENST00000461437 ZSCAN20P17040 1043 aaPredicted RBP17.37■□□□□ 0.37
NUP50-213ENST00000461437 ATF7P17544 494 aaPredicted RBP17.37■□□□□ 0.37
NUP50-213ENST00000461437 LTBRP36941 435 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 FAM189BP81408 668 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 TRIM29Q14134 588 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 CALCRLQ16602 461 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 LEXMQ3ZCV2 418 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 CLLU1OSQ5K130 101 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 PTCRAQ6ISU1 281 aaPredicted RBP17.37■□□□□ 0.37
NUP50-213ENST00000461437 RBM23Q86U06 439 aaKnown RBP17.37■□□□□ 0.37
NUP50-213ENST00000461437 COLGALT1Q8NBJ5 622 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 LPPQ93052 612 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 P2RX5Q93086 422 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 PABPC5Q96DU9 382 aaKnown RBP17.37■□□□□ 0.37
NUP50-213ENST00000461437 CASD1Q96PB1 797 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 PLVAPQ9BX97 442 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 LMAN2LQ9H0V9 348 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 TMEM60Q9H2L4 133 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 LIMCH1Q9UPQ0 1083 aa17.37■□□□□ 0.37
NUP50-213ENST00000461437 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
NUP50-213ENST00000461437 TXKP42681 527 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms