RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CCDC43Q96MW1 224 aaKnown RBP12.53□□□□□ -0.4
SSBP1-202ENST00000461433 ADAMTS10Q9H324 1103 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 KBTBD4Q9NVX7 518 aa12.53□□□□□ -0.4
SSBP1-202ENST00000461433 SUCLA2Q9P2R7 463 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-202ENST00000461433 ZMYND8Q9ULU4 1186 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-202ENST00000461433 NPHP3-ACAD11A0A0J9YXS1 232 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 ACTN4O43707 911 aaKnown RBP12.52□□□□□ -0.4
SSBP1-202ENST00000461433 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.4
SSBP1-202ENST00000461433 SSBP05455 408 aaKnown RBP eCLIP12.52□□□□□ -0.4
SSBP1-202ENST00000461433 RAG1P15918 1043 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 SELPP16109 830 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 GUCY2CP25092 1073 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 CCL23P55773 120 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 MRPS6P82932 125 aaKnown RBP12.52□□□□□ -0.4
SSBP1-202ENST00000461433 MLLT1Q03111 559 aaPredicted RBP12.52□□□□□ -0.4
SSBP1-202ENST00000461433 MAPK7Q13164 816 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.4
SSBP1-202ENST00000461433 DHX8Q14562 1220 aaKnown RBP12.52□□□□□ -0.4
SSBP1-202ENST00000461433 LONRF3Q496Y0 759 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 LRRC8DQ7L1W4 858 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 GPBP1Q86WP2 473 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 KSR1Q8IVT5 923 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 CCDC155Q8N6L0 562 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 MCPH1Q8NEM0 835 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 CDY2AQ9Y6F7 541 aa12.52□□□□□ -0.4
SSBP1-202ENST00000461433 MYH11P35749 1972 aa12.52□□□□□ -0.41
SSBP1-202ENST00000461433 MYMKA6NI61 221 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 RSPH10B2B2RC85 870 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 RPLP2P05387 115 aaKnown RBP12.51□□□□□ -0.41
SSBP1-202ENST00000461433 CTSHP09668 335 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 RSPH10BP0C881 870 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 GLRA2P23416 452 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 SYKP43405 635 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 DNM2P50570 870 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 GPC3P51654 580 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 NLRP11P59045 1033 aaKnown RBP12.51□□□□□ -0.41
SSBP1-202ENST00000461433 LAMTOR4Q0VGL1 99 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 MFSD5Q6N075 450 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 SV2BQ7L1I2 683 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 RSPH3Q86UC2 560 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 FMR1NBQ8N0W7 255 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-202ENST00000461433 TET1Q8NFU7 2136 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 ASAP3Q8TDY4 903 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 TCP11Q8WWU5 503 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 BSNDQ8WZ55 320 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 STAMQ92783 540 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 SCLYQ96I15 445 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 MAP7D2Q96T17 732 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 PPP1R16BQ96T49 567 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
SSBP1-202ENST00000461433 POLR3FQ9H1D9 316 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-202ENST00000461433 CUEDC2Q9H467 287 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 KCND2Q9NZV8 630 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 AKT3Q9Y243 479 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 NR2E3Q9Y5X4 410 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 GOLGA6L4A6NEF3 574 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 NBNO60934 754 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 HIP1RO75146 1068 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 ZNF202O95125 648 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 SLFN14P0C7P3 912 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 LIG1P18858 919 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 GIT2Q14161 759 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 KIZQ2M2Z5 673 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 FAM102BQ5T8I3 360 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 RHPN2Q8IUC4 686 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 TMEM40Q8WWA1 233 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 PSPC1Q8WXF1 523 aaKnown RBP12.51□□□□□ -0.41
SSBP1-202ENST00000461433 BADQ92934 168 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 DNAJC19Q96DA6 116 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 ZNF668Q96K58 619 aaPredicted RBP12.51□□□□□ -0.41
SSBP1-202ENST00000461433 GBP4Q96PP9 640 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 REEP2Q9BRK0 252 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 LMBRD1Q9NUN5 540 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 PRKAG2Q9UGJ0 569 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 COL4A3BPQ9Y5P4 624 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 TRPV2Q9Y5S1 764 aa12.51□□□□□ -0.41
SSBP1-202ENST00000461433 A0A087WZ62 844 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 SFI1A8K8P3 1242 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 ASAP2O43150 1006 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 CSF2RAP15509 400 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 CRYBB1P53674 252 aaPredicted RBP12.5□□□□□ -0.41
SSBP1-202ENST00000461433 UBE2HP62256 183 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 CAPSQ13938 189 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 MXD4Q14582 209 aaPredicted RBP12.5□□□□□ -0.41
SSBP1-202ENST00000461433 DDX12PQ92771 950 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 FDXACB1Q9BRP7 624 aaPredicted RBP12.5□□□□□ -0.41
SSBP1-202ENST00000461433 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
SSBP1-202ENST00000461433 TIPINQ9BVW5 301 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 IFT122Q9HBG6 1241 aa12.5□□□□□ -0.41
SSBP1-202ENST00000461433 H0YGN5 161 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 NR1I2O75469 434 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 CXCL10P02778 98 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 SRGAP2CP0DJJ0 459 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 CDC42EP1Q00587 391 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 FAM160A1Q05DH4 1040 aa12.49□□□□□ -0.41
SSBP1-202ENST00000461433 LPIN1Q14693 890 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms