RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 MIIPQ5JXC2 388 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 E4F1Q66K89 784 aaPredicted RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 TOGARAM2Q6ZUX3 1019 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 EPM2AIP1Q7L775 607 aaPredicted RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 FAM186BQ8IYM0 893 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 ANKRD13CQ8N6S4 541 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 SLC17A8Q8NDX2 589 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 OR8K1Q8NGG5 319 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 GOLGA5Q8TBA6 731 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 IFT74Q96LB3 600 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 DESI2Q9BSY9 194 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 BEGAINQ9BUH8 593 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 TMX1Q9H3N1 280 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 AZI2Q9H6S1 392 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 BCAS3Q9H6U6 928 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 ATP6V0A4Q9HBG4 840 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 METTL14Q9HCE5 456 aaKnown RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 TXNRD2Q9NNW7 524 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 FAM207AQ9NSI2 230 aaPredicted RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 CAPN11Q9UMQ6 739 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 EXOC7Q9UPT5 735 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 TRAF3IP3Q9Y228 551 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 ASTN1O14525 1302 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 MCM3APO60318 1980 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 UQCRHLA0A096LP55 91 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 C2orf72A6NCS6 295 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 ASB14A6NK59 587 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 BTBD19C9JJ37 291 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 EXOC3O60645 756 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 RGS20O76081 388 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 AFPP02771 609 aaKnown RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 OATP04181 439 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 UQCRHP07919 91 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 UBA1P22314 1058 aaKnown RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 ICAM3P32942 547 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 TIE1P35590 1138 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 CYLC1P35663 651 aaPredicted RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 PSMC2P35998 433 aaKnown RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 ZNF131P52739 623 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 ZBED6P86452 979 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 SP2Q02086 613 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 FSTL1Q12841 308 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 MOGSQ13724 837 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 MTF1Q14872 753 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 XKR3Q5GH77 459 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 KCNV1Q6PIU1 500 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 ABHD15Q6UXT9 468 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 ZNF720Q7Z2F6 126 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 HAUS6Q7Z4H7 955 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 FRMD5Q7Z6J6 570 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 ANKRD23Q86SG2 305 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 KIAA1328Q86T90 577 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 TMEM139Q8IV31 216 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 CCDC60Q8IWA6 550 aaPredicted RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 FBXO16Q8IX29 292 aaPredicted RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 DHX37Q8IY37 1157 aaKnown RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 FAM133AQ8N9E0 248 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 MCPH1Q8NEM0 835 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 SHCBP1Q8NEM2 672 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 KIF18AQ8NI77 898 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 KIFAP3Q92845 792 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 BICD1Q96G01 975 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 ERGIC2Q96RQ1 377 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 PARK7Q99497 189 aaKnown RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 GBP3Q9H0R5 595 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 POLR3FQ9H1D9 316 aaPredicted RBP7.45□□□□□ -1.22
MSH2-204ENST00000461394 DEF6Q9H4E7 631 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 PCIF1Q9H4Z3 704 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 TMEM206Q9H813 350 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 EFCC1Q9HA90 598 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 GPRC5CQ9NQ84 441 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 KMT5AQ9NQR1 393 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 NRBP2Q9NSY0 501 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 PAXBP1Q9Y5B6 917 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 ZMYM2Q9UBW7 1377 aa7.45□□□□□ -1.22
MSH2-204ENST00000461394 A0A1W2PQJ5 194 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 DGAT1O75907 488 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 TUBB4AP04350 444 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 MAPTP10636 758 aaKnown RBP7.44□□□□□ -1.22
MSH2-204ENST00000461394 CASQ1P31415 396 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 HOXD13P35453 343 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 MATR3P43243 847 aaKnown RBP eCLIP7.44□□□□□ -1.221e-7■■■□□ 16.1
MSH2-204ENST00000461394 GCLCP48506 637 aaPredicted RBP7.44□□□□□ -1.22
MSH2-204ENST00000461394 HUNKP57058 714 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 KCNA1Q09470 495 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 KCNH2Q12809 1159 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 MAPK7Q13164 816 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 IRF5Q13568 498 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 RAPGEF1Q13905 1077 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 TTLL4Q14679 1199 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 EMC2Q15006 297 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 LY6KQ17RY6 165 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 ARHGAP29Q52LW3 1261 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 TDRD12Q587J7 1177 aaKnown RBP7.44□□□□□ -1.22
MSH2-204ENST00000461394 SPRYD7Q5W111 196 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 RAD9BQ6WBX8 426 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 SYT10Q6XYQ8 523 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 ANO5Q75V66 913 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 RRAGAQ7L523 313 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 DPP9Q86TI2 863 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms