RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 GPC3P51654 580 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 JAK3P52333 1124 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 NLRP5P59047 1200 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 HERC4Q5GLZ8 1057 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-216ENST00000461187 LRCH2Q5VUJ6 765 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 LRRC55Q6ZSA7 311 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 RNF135Q8IUD6 432 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 MICAL1Q8TDZ2 1067 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 TBCKQ8TEA7 893 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 ZNF668Q96K58 619 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-216ENST00000461187 CASD1Q96PB1 797 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 TEKT3Q9BXF9 490 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 TMEM117Q9H0C3 514 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 ZSWIM6Q9HCJ5 1215 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 MUTYHQ9UIF7 546 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 BARX2Q9UMQ3 279 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-216ENST00000461187 TDRD15B5MCY1 1934 aaKnown RBP16.58■□□□□ 0.25
SMPD4-216ENST00000461187 M0R2N6 131 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 FSCN2O14926 492 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 PSMD10O75832 226 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 LAG3P18627 525 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
SMPD4-216ENST00000461187 SSRP1Q08945 709 aaKnown RBP16.58■□□□□ 0.24
SMPD4-216ENST00000461187 TARBP2Q15633 366 aaKnown RBP16.58■□□□□ 0.24
SMPD4-216ENST00000461187 Q4G0T1 1027 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 PDE12Q6L8Q7 609 aaKnown RBP16.58■□□□□ 0.24
SMPD4-216ENST00000461187 ECHDC2Q86YB7 292 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 TRIM22Q8IYM9 498 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 VN1R2Q8NFZ6 395 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 PCDHA4Q9UN74 947 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 LZTS1Q9Y250 596 aa16.58■□□□□ 0.24
SMPD4-216ENST00000461187 CYP3A7-CYP3A51PA0A087WV96 503 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 HOXA2O43364 376 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 EPB41L2O43491 1005 aaKnown RBP16.57■□□□□ 0.24
SMPD4-216ENST00000461187 STBD1O95210 358 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 TDP2O95551 362 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 DARSP14868 501 aaKnown RBP16.57■□□□□ 0.24
SMPD4-216ENST00000461187 ZSCAN20P17040 1043 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-216ENST00000461187 CYP3A7P24462 503 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 PLCB3Q01970 1234 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 TBC1D8BQ0IIM8 1120 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 NPY5RQ15761 445 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 DUSP6Q16828 381 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 B3GNT9Q6UX72 402 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 RDM1Q8NG50 284 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 MRPS27Q92552 414 aaKnown RBP16.57■□□□□ 0.24
SMPD4-216ENST00000461187 ZNF274Q96GC6 653 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-216ENST00000461187 CEP89Q96ST8 783 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 CDCA3Q99618 268 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-216ENST00000461187 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
SMPD4-216ENST00000461187 USP15Q9Y4E8 981 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-216ENST00000461187 LOC730098B7Z3J9 87 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 DEXIO95424 95 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 FGFR4P22455 802 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 DRP2Q13474 957 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 KCNC3Q14003 757 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 CLLU1OSQ5K130 101 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 KCNT2Q6UVM3 1135 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 MIER3Q7Z3K6 550 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 ZNF598Q86UK7 904 aaKnown RBP16.56■□□□□ 0.24
SMPD4-216ENST00000461187 BLIDQ8IZY5 108 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 LRRC43Q8N309 656 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 DAGLBQ8NCG7 672 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 MBOAT7Q96N66 472 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
SMPD4-216ENST00000461187 NIFKQ9BYG3 293 aaKnown RBP16.56■□□□□ 0.24
SMPD4-216ENST00000461187 CYP46A1Q9Y6A2 500 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 C2orf16Q68DN1 1984 aa16.56■□□□□ 0.24
SMPD4-216ENST00000461187 A0A0U1RQF3 1178 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 FSD2A1L4K1 749 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 TMEM150BA6NC51 233 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 ATF7P17544 494 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-216ENST00000461187 PBX3P40426 434 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 CBX2Q14781 532 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-216ENST00000461187 MTERF2Q49AM1 385 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 XKR3Q5GH77 459 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 PLPP4Q5VZY2 271 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 TMEM184AQ6ZMB5 413 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 HFE2Q6ZVN8 426 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 ABI1Q8IZP0 508 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 ETNPPLQ8TBG4 499 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 NLRP7Q8WX94 980 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 SUSD6Q92537 303 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 ZNF558Q96NG5 402 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 SCLT1Q96NL6 688 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 AIFM3Q96NN9 605 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 TM6SF1Q9BZW5 370 aa16.55■□□□□ 0.24
SMPD4-216ENST00000461187 SEPT9Q9UHD8 586 aaPredicted RBP16.55■□□□□ 0.24
SMPD4-216ENST00000461187 PUF60Q9UHX1 559 aaKnown RBP16.55■□□□□ 0.24
SMPD4-216ENST00000461187 MTCL1Q9Y4B5 1905 aaKnown RBP16.55■□□□□ 0.24
SMPD4-216ENST00000461187 IGKV6-21A0A0C4DH24 114 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 CPLX1O14810 134 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 CSDE1O75534 798 aaKnown RBP16.54■□□□□ 0.24
SMPD4-216ENST00000461187 EOMESO95936 686 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 MOXD1Q6UVY6 613 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 FAM177A1Q8N128 213 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-216ENST00000461187 RNF169Q8NCN4 708 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 EDAQ92838 391 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 TCF25Q9BQ70 676 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms