RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 CHP1Q99653 195 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 ZHX3Q9H4I2 956 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 TMEM206Q9H813 350 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 CEP72Q9P209 647 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 ARMCX3Q9UH62 379 aaPredicted RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 REXO2Q9Y3B8 237 aaKnown RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 DAAM1Q9Y4D1 1078 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 DDX39AO00148 427 aaKnown RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 EPHB6O15197 1021 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 ZNF862O60290 1169 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 SLC34A2O95436 690 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 PSAPP07602 524 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 SCP2P22307 547 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 ARHGAP25P42331 645 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 FKBP1BP68106 108 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 KCNA1Q09470 495 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 KCNH2Q12809 1159 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 ASTE1Q2TB18 679 aaPredicted RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 ODR4Q5SWX8 454 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 SYT10Q6XYQ8 523 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 ANO5Q75V66 913 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 SPIRE2Q8WWL2 714 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 SLC35C1Q96A29 364 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 GBP3Q9H0R5 595 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 AGPAT3Q9NRZ7 376 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 RBPJLQ9UBG7 517 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 MYO6Q9UM54 1294 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 PLXNA1Q9UIW2 1896 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 MCM3APO60318 1980 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 SSU72P8A0A1W2PR75 194 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 SOWAHBA6NEL2 793 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 SFI1A8K8P3 1242 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 BACH1O14867 736 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 PMM2O15305 246 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 AFPP02771 609 aaKnown RBP11.93□□□□□ -0.5
IFT88-204ENST00000461115 PSMC2P35998 433 aaKnown RBP11.93□□□□□ -0.5
IFT88-204ENST00000461115 ACTR2P61160 394 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
IFT88-204ENST00000461115 ENPEPQ07075 957 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 PPP2R5AQ15172 486 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 ZC2HC1CQ53FD0 456 aaPredicted RBP11.93□□□□□ -0.5
IFT88-204ENST00000461115 PDXDC1Q6P996 788 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 OTUD6AQ7L8S5 288 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 HS2ST1Q7LGA3 356 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 KHSRPQ92945 711 aaKnown RBP eCLIP11.93□□□□□ -0.5
IFT88-204ENST00000461115 FGD4Q96M96 766 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 DESI2Q9BSY9 194 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 GANQ9H2C0 597 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 ZNHIT6Q9NWK9 470 aaKnown RBP11.93□□□□□ -0.5
IFT88-204ENST00000461115 PKD2L1Q9P0L9 805 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 KCNG1Q9UIX4 513 aa11.93□□□□□ -0.5
IFT88-204ENST00000461115 MAFBQ9Y5Q3 323 aaPredicted RBP11.93□□□□□ -0.5
IFT88-204ENST00000461115 SYNGAP1Q96PV0 1343 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 RBAK-RBAKDNI3L0D1 243 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 PES1O00541 588 aaKnown RBP11.92□□□□□ -0.5
IFT88-204ENST00000461115 DGAT1O75907 488 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 SUPT20HL2P0C7V6 817 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 EPB41P11171 864 aaKnown RBP11.92□□□□□ -0.5
IFT88-204ENST00000461115 XRCC5P13010 732 aaKnown RBP11.92□□□□□ -0.5
IFT88-204ENST00000461115 ABCD1P33897 745 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 CYLC1P35663 651 aaPredicted RBP11.92□□□□□ -0.5
IFT88-204ENST00000461115 GJA5P36382 358 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 KRT83P78385 493 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 CNTN2Q02246 1040 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 PLS1Q14651 629 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 XKR3Q5GH77 459 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 HGSNATQ68CP4 663 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 GADL1Q6ZQY3 521 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 MOB2Q70IA6 237 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 ANKRD35Q8N283 1001 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 NEK11Q8NG66 645 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 KIFAP3Q92845 792 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 OPTNQ96CV9 577 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 CEP89Q96ST8 783 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 MROH8Q9H579 483 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 HAUS4Q9H6D7 363 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 NHEJ1Q9H9Q4 299 aaPredicted RBP11.92□□□□□ -0.5
IFT88-204ENST00000461115 AIPL1Q9NZN9 384 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 USP20Q9Y2K6 914 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 SAMM50Q9Y512 469 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 PPME1Q9Y570 386 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 PCDHGA4Q9Y5G9 962 aa11.92□□□□□ -0.5
IFT88-204ENST00000461115 MYH10P35580 1976 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 SOCS7O14512 581 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 ERCC3P19447 782 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 OSBPP22059 807 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 CASP4P49662 377 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 FOXK1P85037 733 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 SP2Q02086 613 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 SNAPC2Q13487 334 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 TUBB2AQ13885 445 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 MIS18BP1Q6P0N0 1132 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 KCNV1Q6PIU1 500 aa11.91□□□□□ -0.5
IFT88-204ENST00000461115 CCDC60Q8IWA6 550 aaPredicted RBP11.91□□□□□ -0.5
IFT88-204ENST00000461115 PLPP6Q8IY26 295 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms