RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 TRIM66O15016 1216 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KIF1CO43896 1103 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CPB1P15086 417 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TNNI1P19237 187 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SDHBP21912 280 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 HNRNPH1P31943 449 aaKnown RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MAGEA1P43355 309 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PLCB3Q01970 1234 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RBL2Q08999 1139 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 BFSP1Q12934 665 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TRIM68Q6AZZ1 485 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 DCUN1D2Q6PH85 259 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 C1QTNF7Q9BXJ2 289 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 USP44Q9H0E7 712 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GREM2Q9H772 168 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SEPT9Q9UHD8 586 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 USP20Q9Y2K6 914 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SOWAHDA6NJG2 315 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 OPLAHO14841 1288 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CASP14P31944 242 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PSEN1P49768 467 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ASPHQ12797 758 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GEN1Q17RS7 908 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TYW1BQ6NUM6 668 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RINT1Q6NUQ1 792 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RIN2Q8WYP3 895 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RIPOR3Q96MK2 946 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MROH8Q9H579 483 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PSTPIP2Q9H939 334 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 C1orf112Q9NSG2 853 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ADAMTS7Q9UKP4 1686 aa6.73□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CEP104O60308 925 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 STAM2O75886 525 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CLTAP09496 248 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CTNNA1P35221 906 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ALDH7A1P49419 539 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ITKQ08881 620 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KIAA1755Q5JYT7 1200 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 EPHA10Q5JZY3 1008 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RSBN1LQ6PCB5 846 aaPredicted RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SARM1Q6SZW1 724 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 BZW1Q7L1Q6 419 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RAB44Q7Z6P3 723 aaPredicted RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SLAIN1Q8ND83 568 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 UBN2Q6ZU65 1347 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SPDYE2BA6NHP3 402 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PRRG1O14668 218 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SPDYE6P0CI01 402 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SRSF11Q05519 484 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ITIH3Q06033 890 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RAPGEF1Q13905 1077 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PROSER3Q2NL68 480 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KRT71Q3SY84 523 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SGO2Q562F6 1265 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SRBD1Q8N5C6 995 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SAMD3Q8N6K7 520 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 B3GALNT2Q8NCR0 500 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 IFIH1Q9BYX4 1025 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RNF208Q9H0X6 261 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KANSL3Q9P2N6 904 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 FEZ2Q9UHY8 353 aaPredicted RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SLC13A4Q9UKG4 626 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MINPP1Q9UNW1 487 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SALL1Q9NSC2 1324 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ZMYM2Q9UBW7 1377 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 A0A1W2PQ27 194 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 A0A1W2PQ64 194 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 A0A1W2PQD8 194 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 A6NJR5 290 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ZNF197O14709 1029 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 COBLO75128 1261 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SLFN14P0C7P3 912 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SFNP31947 248 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 PDIA6Q15084 440 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TSNAXIP1Q2TAA8 658 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MYCT1Q8N699 235 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 OR8K1Q8NGG5 319 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MAP4K1Q92918 833 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 STMN2Q93045 179 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 UBE2OQ9C0C9 1292 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SLC28A3Q9HAS3 691 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 NKIRAS1Q9NYS0 192 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SERPINB13Q9UIV8 391 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 HEMK1Q9Y5R4 338 aaPredicted RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 LRRIQ4A6NIV6 560 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KCNJ18B7U540 433 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GPR182O15218 404 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CTIFO43310 598 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SYNCRIPO60506 623 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ENTPD3O75355 529 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MLYCDO95822 493 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 APOEP02649 317 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ERCC3P19447 782 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CRKP46108 304 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KCNJ12Q14500 433 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KRT81Q14533 505 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 TEAD4Q15561 434 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CALCRLQ16602 461 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 Q3C1V9 767 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms