RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 DRP2Q13474 957 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 CUL4BQ13620 913 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 POSTNQ15063 836 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 C1orf53Q5VUE5 145 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 IER5Q5VY09 327 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 TAF2Q6P1X5 1199 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 ANKRD33Q7Z3H0 272 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 SH3RF1Q7Z6J0 888 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 RSPH3Q86UC2 560 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 LINC01465Q8N7H1 131 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 DNAJB3Q8WWF6 145 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
UPF2-204ENST00000460569 KIFAP3Q92845 792 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 DRC1Q96MC2 740 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 CTAGE1Q96RT6 745 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 PPP1R16BQ96T49 567 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 TRIM9Q9C026 710 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 NUP62CLQ9H1M0 184 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 ZHX3Q9H4I2 956 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 POLD4Q9HCU8 107 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 SUCLA2Q9P2R7 463 aaPredicted RBP11.28□□□□□ -0.6
UPF2-204ENST00000460569 ODF2LQ9ULJ1 636 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 CD4P01730 458 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 VTNP04004 478 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 TMEM62Q0P6H9 643 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 MAPK7Q13164 816 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 MKRN4PQ13434 485 aaPredicted RBP11.27□□□□□ -0.61
UPF2-204ENST00000460569 PNOCQ13519 176 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 GIT2Q14161 759 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 CAMK4Q16566 473 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 RHPN2Q8IUC4 686 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 KIAA0319LQ8IZA0 1049 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 DAW1Q8N136 415 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 CCDC155Q8N6L0 562 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 ASAP3Q8TDY4 903 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 DHX38Q92620 1227 aaKnown RBP11.27□□□□□ -0.61
UPF2-204ENST00000460569 WNT8BQ93098 351 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 TOX2Q96NM4 488 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 C7orf25Q9BPX7 421 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 CLSTN2Q9H4D0 955 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 COL4A3BPQ9Y5P4 624 aa11.27□□□□□ -0.61
UPF2-204ENST00000460569 SFI1A8K8P3 1242 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 M0QZ92 97 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 RPLP2P05387 115 aaKnown RBP11.26□□□□□ -0.61
UPF2-204ENST00000460569 MYL1P05976 194 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 CLTBP09497 229 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 CTSHP09668 335 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 GLRA2P23416 452 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 ARL2P36404 184 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 THPOP40225 353 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 MXD4Q14582 209 aaPredicted RBP11.26□□□□□ -0.61
UPF2-204ENST00000460569 CNNM4Q6P4Q7 775 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 SFR1Q86XK3 245 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 CCDC65Q8IXS2 484 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 PRPF31Q8WWY3 499 aaKnown RBP11.26□□□□□ -0.61
UPF2-204ENST00000460569 ERCC4Q92889 916 aaPredicted RBP11.26□□□□□ -0.61
UPF2-204ENST00000460569 DNAJC19Q96DA6 116 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 ZNF668Q96K58 619 aaPredicted RBP11.26□□□□□ -0.61
UPF2-204ENST00000460569 IFT74Q96LB3 600 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 NLRP4Q96MN2 994 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 HTATIP2Q9BUP3 242 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 PARVGQ9HBI0 331 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 PANK4Q9NVE7 773 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 GINS2Q9Y248 185 aa11.26□□□□□ -0.61
UPF2-204ENST00000460569 LRRIQ4A6NIV6 560 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 CCDC169A6NNP5 214 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 SMC2O95347 1197 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 SRGAP2CP0DJJ0 459 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 PLS3P13797 630 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 GAP43P17677 238 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 GPC3P51654 580 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 ZNF131P52739 623 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 PEX3P56589 373 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 NLRP11P59045 1033 aaKnown RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 MRPS6P82932 125 aaKnown RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 FAAP100Q0VG06 881 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 LAMTOR4Q0VGL1 99 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 DPYDQ12882 1025 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 COASYQ13057 564 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 DMP1Q13316 513 aaPredicted RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 BFSP2Q13515 415 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 CAPSQ13938 189 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 TFDP1Q14186 410 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 PPP2R5AQ15172 486 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 KIZQ2M2Z5 673 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 TRIM71Q2Q1W2 868 aaKnown RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 KLHL40Q2TBA0 621 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 ODR4Q5SWX8 454 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 UNC13DQ70J99 1090 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 KSR1Q8IVT5 923 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 ELOA2Q8IYF1 753 aaPredicted RBP11.25□□□□□ -0.61
UPF2-204ENST00000460569 MYCT1Q8N699 235 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 RNF149Q8NC42 400 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 CAGE1Q8TC20 777 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 NLRP7Q8WX94 980 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 BSNDQ8WZ55 320 aa11.25□□□□□ -0.61
UPF2-204ENST00000460569 SMARCE1Q969G3 411 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms