RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 ST3GAL5Q9UNP4 418 aa23.87■■□□□ 1.41
ABCD4-202ENST00000460308 TMEM265A0A087WTH1 108 aa23.86■■□□□ 1.41
ABCD4-202ENST00000460308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.86■■□□□ 1.41
ABCD4-202ENST00000460308 ENPP3O14638 875 aa23.86■■□□□ 1.41
ABCD4-202ENST00000460308 EIF4BP23588 611 aaKnown RBP23.86■■□□□ 1.41
ABCD4-202ENST00000460308 BECN1Q14457 450 aa23.86■■□□□ 1.41
ABCD4-202ENST00000460308 FAM173BQ6P4H8 233 aa23.86■■□□□ 1.41
ABCD4-202ENST00000460308 TMCO2Q7Z6W1 182 aaPredicted RBP23.86■■□□□ 1.41
ABCD4-202ENST00000460308 NKX2-4Q9H2Z4 354 aa23.86■■□□□ 1.41
ABCD4-202ENST00000460308 ERVK-5Q9HDB9 667 aa23.86■■□□□ 1.41
ABCD4-202ENST00000460308 KIAA1024Q9UPX6 916 aa23.86■■□□□ 1.41
ABCD4-202ENST00000460308 PP2D1A8MPX8 630 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 ASAP2O43150 1006 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 UPP2O95045 317 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 GJB5O95377 273 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 MYOGP15173 224 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 CDC25AP30304 524 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 ZRSR1Q15695 479 aaKnown RBP23.85■■□□□ 1.41
ABCD4-202ENST00000460308 ZNF410Q86VK4 478 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 PRPF31Q8WWY3 499 aaKnown RBP23.85■■□□□ 1.41
ABCD4-202ENST00000460308 NLRP4Q96MN2 994 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 FAM161BQ96MY7 647 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 INO80BQ9C086 356 aaPredicted RBP23.85■■□□□ 1.41
ABCD4-202ENST00000460308 SEMA6BQ9H3T3 888 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 DDX19AQ9NUU7 478 aaKnown RBP23.85■■□□□ 1.41
ABCD4-202ENST00000460308 YBX2Q9Y2T7 364 aaKnown RBP23.85■■□□□ 1.41
ABCD4-202ENST00000460308 COL4A3BPQ9Y5P4 624 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 CLIC4Q9Y696 253 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 GBF1Q92538 1859 aa23.85■■□□□ 1.41
ABCD4-202ENST00000460308 ARID2Q68CP9 1835 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 A0A087WZ62 844 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 ARHGEF35A5YM69 484 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 DARSP14868 501 aaKnown RBP23.84■■□□□ 1.41
ABCD4-202ENST00000460308 CEBPZQ03701 1054 aaKnown RBP23.84■■□□□ 1.41
ABCD4-202ENST00000460308 FOXD4L5Q5VV16 416 aaPredicted RBP23.84■■□□□ 1.41
ABCD4-202ENST00000460308 FAM228AQ86W67 206 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 KSR1Q8IVT5 923 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 FOXD4L4Q8WXT5 416 aaPredicted RBP23.84■■□□□ 1.41
ABCD4-202ENST00000460308 TOP1MTQ969P6 601 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 AK8Q96MA6 479 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 RAD9AQ99638 391 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 FDXACB1Q9BRP7 624 aaPredicted RBP23.84■■□□□ 1.41
ABCD4-202ENST00000460308 ZNF576Q9H609 170 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 DNM3Q9UQ16 869 aa23.84■■□□□ 1.41
ABCD4-202ENST00000460308 DENND3A2RUS2 1198 aa23.83■■□□□ 1.41
ABCD4-202ENST00000460308 USO1O60763 962 aaKnown RBP23.83■■□□□ 1.41
ABCD4-202ENST00000460308 SRGAP2CP0DJJ0 459 aa23.83■■□□□ 1.41
ABCD4-202ENST00000460308 ECM1Q16610 540 aa23.83■■□□□ 1.41
ABCD4-202ENST00000460308 CDK5RAP3Q96JB5 506 aa23.83■■□□□ 1.41
ABCD4-202ENST00000460308 TMX1Q9H3N1 280 aa23.83■■□□□ 1.41
ABCD4-202ENST00000460308 ZSCAN20P17040 1043 aaPredicted RBP23.82■■□□□ 1.4
ABCD4-202ENST00000460308 LAMTOR4Q0VGL1 99 aa23.82■■□□□ 1.4
ABCD4-202ENST00000460308 MXD4Q14582 209 aaPredicted RBP23.82■■□□□ 1.4
ABCD4-202ENST00000460308 PPP2R2DQ66LE6 453 aa23.82■■□□□ 1.4
ABCD4-202ENST00000460308 PADI6Q6TGC4 694 aa23.82■■□□□ 1.4
ABCD4-202ENST00000460308 TSPYL2Q9H2G4 693 aaPredicted RBP23.82■■□□□ 1.4
ABCD4-202ENST00000460308 TTYH1Q9H313 450 aaPredicted RBP23.82■■□□□ 1.4
ABCD4-202ENST00000460308 XPNPEP1Q9NQW7 623 aa23.82■■□□□ 1.4
ABCD4-202ENST00000460308 INSL6Q9Y581 213 aa23.82■■□□□ 1.4
ABCD4-202ENST00000460308 PTPRSQ13332 1948 aa23.82■■□□□ 1.4
ABCD4-202ENST00000460308 CA3P07451 260 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 ZSCAN22P10073 491 aaPredicted RBP23.81■■□□□ 1.4
ABCD4-202ENST00000460308 IBSPP21815 317 aaPredicted RBP23.81■■□□□ 1.4
ABCD4-202ENST00000460308 SFPQP23246 707 aaKnown RBP eCLIP23.81■■□□□ 1.4
ABCD4-202ENST00000460308 UBA7P41226 1012 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 TFDP1Q14186 410 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 MAEAQ7L5Y9 396 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 RTN4RL1Q86UN2 441 aaPredicted RBP23.81■■□□□ 1.4
ABCD4-202ENST00000460308 MCPH1Q8NEM0 835 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 ZNF396Q96N95 335 aaPredicted RBP23.81■■□□□ 1.4
ABCD4-202ENST00000460308 ADAM2Q99965 735 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 MMTAG2Q9BU76 263 aaKnown RBP23.81■■□□□ 1.4
ABCD4-202ENST00000460308 NT5C3AQ9H0P0 336 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 BHMT2Q9H2M3 363 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 MTMR10Q9NXD2 777 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 MYO9BQ13459 2157 aa23.81■■□□□ 1.4
ABCD4-202ENST00000460308 CSDE1O75534 798 aaKnown RBP23.8■■□□□ 1.4
ABCD4-202ENST00000460308 LONP1P36776 959 aaKnown RBP23.8■■□□□ 1.4
ABCD4-202ENST00000460308 PTPAQ15257 358 aa23.8■■□□□ 1.4
ABCD4-202ENST00000460308 CABP7Q86V35 215 aa23.8■■□□□ 1.4
ABCD4-202ENST00000460308 RNF149Q8NC42 400 aa23.8■■□□□ 1.4
ABCD4-202ENST00000460308 USP28Q96RU2 1077 aa23.8■■□□□ 1.4
ABCD4-202ENST00000460308 YME1L1Q96TA2 773 aa23.8■■□□□ 1.4
ABCD4-202ENST00000460308 C1orf112Q9NSG2 853 aa23.8■■□□□ 1.4
ABCD4-202ENST00000460308 RNF216Q9NWF9 866 aaPredicted RBP23.8■■□□□ 1.4
ABCD4-202ENST00000460308 LRFN2Q9ULH4 789 aa23.8■■□□□ 1.4
ABCD4-202ENST00000460308 E9PMD0 336 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 EYA4O95677 639 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 STAG3L1P0CL83 205 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 CYP11B2P19099 503 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 FGFR4P22455 802 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 MARCKSP29966 332 aaPredicted RBP23.79■■□□□ 1.4
ABCD4-202ENST00000460308 ARL2P36404 184 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 FAM102BQ5T8I3 360 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 SRGAP1Q7Z6B7 1085 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 KCTD17Q8N5Z5 321 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 RASSF8Q8NHQ8 419 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 LINC01599Q8WXQ3 324 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 CALML4Q96GE6 196 aa23.79■■□□□ 1.4
ABCD4-202ENST00000460308 POLR3FQ9H1D9 316 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms