RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 KIF3CO14782 793 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 EIF3HO15372 352 aaKnown RBP eCLIP16.73■□□□□ 0.27
LMNB1-203ENST00000460265 PEX3P56589 373 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 MICALCLQ6ZW33 695 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 MAATS1Q7Z4T9 603 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 SPATA4Q8NEY3 305 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 ETNPPLQ8TBG4 499 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 HDAC7Q8WUI4 952 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 WDR18Q9BV38 432 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 AP1M1Q9BXS5 423 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 SLITRK3O94933 977 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 BAG6P46379 1132 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 E2F5Q15329 346 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 TRIM59Q8IWR1 403 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 GMCL1P1Q8NEA9 526 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 A0A1W2PQJ5 194 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 ZBED4O75132 1171 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 RPSAP08865 295 aaKnown RBP16.73■□□□□ 0.27
LMNB1-203ENST00000460265 H2AFZP0C0S5 128 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 SSR1P43307 286 aaKnown RBP16.73■□□□□ 0.27
LMNB1-203ENST00000460265 NBPF20Q3BBV1 942 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 H2AFVQ71UI9 128 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 FAXDC2Q96IV6 333 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 RMDN3Q96TC7 470 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 TTYH3Q9C0H2 523 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 EPB41L5Q9HCM4 733 aa16.73■□□□□ 0.27
LMNB1-203ENST00000460265 CHORDC1Q9UHD1 332 aaPredicted RBP16.73■□□□□ 0.27
LMNB1-203ENST00000460265 IRF6O14896 467 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 HIP1RO75146 1068 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 DLATP10515 647 aaKnown RBP16.72■□□□□ 0.27
LMNB1-203ENST00000460265 GCKP35557 465 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 CAP2P40123 477 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 GCLMP48507 274 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 MTMR2Q13614 643 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 TMEM132AQ24JP5 1023 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 PPM1KQ8N3J5 372 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 ELMO3Q96BJ8 720 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 UNC45AQ9H3U1 944 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 DMGDHQ9UI17 866 aaKnown RBP16.72■□□□□ 0.27
LMNB1-203ENST00000460265 MEFVO15553 781 aaPredicted RBP16.72■□□□□ 0.27
LMNB1-203ENST00000460265 MTMR1Q13613 665 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 GLYCTKQ8IVS8 523 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 ZNF526Q8TF50 670 aaPredicted RBP16.72■□□□□ 0.27
LMNB1-203ENST00000460265 KCNH7Q9NS40 1196 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 WNT10BO00744 389 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 TBX3O15119 743 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 SLC16A4O15374 487 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 NPEPPSP55786 919 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 OTOP1Q7RTM1 612 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 CTNNBL1Q8WYA6 563 aaPredicted RBP16.72■□□□□ 0.27
LMNB1-203ENST00000460265 SALL4Q9UJQ4 1053 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 DNAJC12Q9UKB3 198 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
LMNB1-203ENST00000460265 TISP43B9A030 160 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 PDXKO00764 312 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 SKAP2O75563 359 aaPredicted RBP16.71■□□□□ 0.27
LMNB1-203ENST00000460265 IRX1P78414 480 aaPredicted RBP16.71■□□□□ 0.27
LMNB1-203ENST00000460265 PREPLQ4J6C6 727 aaPredicted RBP16.71■□□□□ 0.27
LMNB1-203ENST00000460265 ODF2Q5BJF6 829 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 FIGNQ5HY92 759 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 KCTD16Q68DU8 428 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 WDR93Q6P2C0 686 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 NLRX1Q86UT6 975 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 FAM160B2Q86V87 743 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 RPGRIP1Q96KN7 1286 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 CCDC114Q96M63 670 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 SELENOOQ9BVL4 669 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 GPRC5CQ9NQ84 441 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 PIM2Q9P1W9 311 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 GAP43P17677 238 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 PEX19P40855 299 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 ATP1A2P50993 1020 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 PDCLQ13371 301 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 IFI16Q16666 785 aaKnown RBP16.71■□□□□ 0.27
LMNB1-203ENST00000460265 BAP1Q92560 729 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 TAOK3Q9H2K8 898 aa16.71■□□□□ 0.27
LMNB1-203ENST00000460265 UBE2TQ9NPD8 197 aaPredicted RBP16.71■□□□□ 0.27
LMNB1-203ENST00000460265 SHOX2O60902 331 aaPredicted RBP16.71■□□□□ 0.26
LMNB1-203ENST00000460265 SLC18A3Q16572 532 aa16.71■□□□□ 0.26
LMNB1-203ENST00000460265 ZNF746Q6NUN9 644 aaPredicted RBP16.71■□□□□ 0.26
LMNB1-203ENST00000460265 PLIN4Q96Q06 1357 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 PITPNM2Q9BZ72 1349 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 ANO9A1A5B4 782 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 CRYMQ14894 314 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 Q4G0T1 1027 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 PLA2G4FQ68DD2 849 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 PHLDB2Q86SQ0 1253 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 CTTNBP2NLQ9P2B4 639 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 FEM1BQ9UK73 627 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 HSF2BPO75031 334 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 HEXIM1O94992 359 aaKnown RBP16.7■□□□□ 0.26
LMNB1-203ENST00000460265 PON1P27169 355 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 POLD1P28340 1107 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 DRAP1Q14919 205 aaPredicted RBP16.7■□□□□ 0.26
LMNB1-203ENST00000460265 EDRF1Q3B7T1 1238 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 AP1ARQ63HQ0 302 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms