RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 NLRP11P59045 1033 aaKnown RBP16.7■□□□□ 0.26
ATG4B-213ENST00000460211 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 LINC01465Q8N7H1 131 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 GDPD5Q8WTR4 605 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 KHSRPQ92945 711 aaKnown RBP eCLIP16.7■□□□□ 0.26
ATG4B-213ENST00000460211 TOP1MTQ969P6 601 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 INTS4Q96HW7 963 aaKnown RBP16.7■□□□□ 0.26
ATG4B-213ENST00000460211 OSMRQ99650 979 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 HSD17B14Q9BPX1 270 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-213ENST00000460211 MTUS1Q9ULD2 1270 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 STK24Q9Y6E0 443 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 IGKV6-21A0A0C4DH24 114 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-213ENST00000460211 TMEM150BA6NC51 233 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 FAM86C2PA6NEL3 165 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 GAS2O43903 313 aaKnown RBP16.69■□□□□ 0.26
ATG4B-213ENST00000460211 LPXNO60711 386 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 GPR32O75388 356 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 UPP2O95045 317 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 LYPLA2O95372 231 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 MKRN4PQ13434 485 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-213ENST00000460211 XKR9Q5GH70 373 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 PLA2G4FQ68DD2 849 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 NLRP7Q8WX94 980 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 PPP1R16BQ96T49 567 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 YME1L1Q96TA2 773 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 SH2D3AQ9BRG2 576 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 CDHR5Q9HBB8 845 aa16.69■□□□□ 0.26
ATG4B-213ENST00000460211 SUCLA2Q9P2R7 463 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-213ENST00000460211 POTEMA6NI47 508 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 XRCC6P12956 609 aaKnown RBP eCLIP16.68■□□□□ 0.26
ATG4B-213ENST00000460211 TOB1P50616 345 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-213ENST00000460211 GPC3P51654 580 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 NPEPPSP55786 919 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 PTGDRQ13258 359 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 TMEM31Q5JXX7 168 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 HAUS3Q68CZ6 603 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 SNX21Q969T3 373 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 CEP89Q96ST8 783 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 GCOM2Q9BZD3 368 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-213ENST00000460211 INO80BQ9C086 356 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-213ENST00000460211 ERVK-5Q9HDB9 667 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 TUFT1Q9NNX1 390 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 ANKEF1Q9NU02 776 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 WRAP73Q9P2S5 460 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-213ENST00000460211 ST3GAL5Q9UNP4 418 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 HCN4Q9Y3Q4 1203 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 NOC2LQ9Y3T9 749 aaKnown RBP16.68■□□□□ 0.26
ATG4B-213ENST00000460211 PCDHB6Q9Y5E3 794 aa16.68■□□□□ 0.26
ATG4B-213ENST00000460211 DENND3A2RUS2 1198 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 STAG3L1P0CL83 205 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 EIF4BP23588 611 aaKnown RBP16.67■□□□□ 0.26
ATG4B-213ENST00000460211 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATG4B-213ENST00000460211 PDIA5Q14554 519 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 NBR1Q14596 966 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 BRAPQ7Z569 592 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 TCP11Q8WWU5 503 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 POLR3CQ9BUI4 534 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-213ENST00000460211 ADAMTS10Q9H324 1103 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.67■□□□□ 0.26
ATG4B-213ENST00000460211 C1orf112Q9NSG2 853 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 EVPLQ92817 2033 aa16.67■□□□□ 0.26
ATG4B-213ENST00000460211 VPS37CA5D8V6 355 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-213ENST00000460211 ASAP2O43150 1006 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 ZSCAN20P17040 1043 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-213ENST00000460211 MUTP22033 750 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 HTRA4P83105 476 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-213ENST00000460211 DTHD1Q6ZMT9 781 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 ZNF410Q86VK4 478 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 RHPN2Q8IUC4 686 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 C4orf32Q8N8J7 132 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 TMEM40Q8WWA1 233 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
ATG4B-213ENST00000460211 NACC1Q96RE7 527 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 MTRQ99707 1265 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
ATG4B-213ENST00000460211 LRWD1Q9UFC0 647 aa16.66■□□□□ 0.26
ATG4B-213ENST00000460211 DGAT1O75907 488 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 HSP90AA1P07900 732 aaKnown RBP16.65■□□□□ 0.26
ATG4B-213ENST00000460211 DARSP14868 501 aaKnown RBP16.65■□□□□ 0.26
ATG4B-213ENST00000460211 RPA1P27694 616 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-213ENST00000460211 PRPHP41219 470 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 DRP2Q13474 957 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 EMC2Q15006 297 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 FAM228AQ86W67 206 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 CATSPER3Q86XQ3 398 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 ZNF579Q8NAF0 562 aaKnown RBP16.65■□□□□ 0.26
ATG4B-213ENST00000460211 ZNF668Q96K58 619 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-213ENST00000460211 TGS1Q96RS0 853 aaKnown RBP16.65■□□□□ 0.26
ATG4B-213ENST00000460211 ADAM2Q99965 735 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 CD320Q9NPF0 282 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 C11orf16Q9NQ32 467 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 LRFN2Q9ULH4 789 aa16.65■□□□□ 0.26
ATG4B-213ENST00000460211 ZBTB39O15060 712 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 BMP15O95972 392 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 SPATA31C1P0DKV0 1188 aa16.64■□□□□ 0.25
ATG4B-213ENST00000460211 CCT6AP40227 531 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms