RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZRANB2O95218 330 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTPRU-205ENST00000460170 SFNP31947 248 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 APOL6Q9BWW8 343 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 NACA2Q9H009 215 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 TAF1DQ9H5J8 278 aaPredicted RBP15.87■□□□□ 0.13
PTPRU-205ENST00000460170 FTLP02792 175 aaPredicted RBP15.87■□□□□ 0.13
PTPRU-205ENST00000460170 CASP7P55210 303 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 FAM47CQ5HY64 1035 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 PHLDB3Q6NSJ2 640 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 TCP11Q8WWU5 503 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 RGL1Q9NZL6 768 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 SYNJ2BP-COX16A0A087WUM0 186 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 ARHGAP42A6NI28 874 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 SMARCA1P28370 1054 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 SLC18A3Q16572 532 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 ERICH1Q86X53 443 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 KCTD6Q8NC69 237 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 RFFLQ8WZ73 363 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 ACTR5Q9H9F9 607 aaPredicted RBP15.87■□□□□ 0.13
PTPRU-205ENST00000460170 DNAJC17Q9NVM6 304 aaKnown RBP15.87■□□□□ 0.13
PTPRU-205ENST00000460170 COX16Q9P0S2 106 aa15.87■□□□□ 0.13
PTPRU-205ENST00000460170 TPD52P55327 224 aaPredicted RBP15.86■□□□□ 0.13
PTPRU-205ENST00000460170 ZNF211Q13398 564 aaPredicted RBP15.86■□□□□ 0.13
PTPRU-205ENST00000460170 KLHL29Q96CT2 875 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 NPHP3-ACAD11A0A0J9YXS1 232 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 SOX5P35711 763 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 SCARA5Q6ZMJ2 495 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 DPP9Q86TI2 863 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 ZNF277Q9NRM2 450 aaPredicted RBP15.86■□□□□ 0.13
PTPRU-205ENST00000460170 FGFR2P21802 821 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 PDE1BQ01064 536 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 MUM1Q2TAK8 710 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 DALRD3Q5D0E6 543 aaKnown RBP15.86■□□□□ 0.13
PTPRU-205ENST00000460170 NSUN6Q8TEA1 469 aaKnown RBP15.86■□□□□ 0.13
PTPRU-205ENST00000460170 TUFT1Q9NNX1 390 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
PTPRU-205ENST00000460170 KRT39Q6A163 491 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 OR6B2Q6IFH4 312 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 DARS2Q6PI48 645 aaKnown RBP15.86■□□□□ 0.13
PTPRU-205ENST00000460170 PLCD3Q8N3E9 789 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 FAM213AQ9BRX8 229 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 SLITRK6Q9H5Y7 841 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 RNF146Q9NTX7 359 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 NYAP2Q9P242 653 aa15.86■□□□□ 0.13
PTPRU-205ENST00000460170 PXDNQ92626 1479 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 MYO1CO00159 1063 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 AP5Z1O43299 807 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 NMT1P30419 496 aaKnown RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 TOB1P50616 345 aaPredicted RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 FBXL16Q8N461 479 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 GJD4Q96KN9 370 aaPredicted RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 LRRC1Q9BTT6 524 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 HAUS2Q9NVX0 235 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 TRIM10Q9UDY6 481 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 BCAP29Q9UHQ4 241 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 NOC2LQ9Y3T9 749 aaKnown RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 TBX3O15119 743 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 ZNF185O15231 689 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 EVI5O60447 810 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 PSMC5P62195 406 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 ZNF746Q6NUN9 644 aaPredicted RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 ZNF564Q8TBZ8 553 aaPredicted RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 RPF1Q9H9Y2 349 aaKnown RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 CLDN3O15551 220 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 MT-ND3P03897 115 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 OSBPP22059 807 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 RNASELQ05823 741 aaKnown RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 PPP2R5CQ13362 524 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 PDIK1LQ8N165 341 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 TMEM35BQ8NCS4 154 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 ESYT2A0FGR8 921 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 VGLL3A8MV65 326 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 NDUFB10O96000 172 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 GARSP41250 739 aaKnown RBP15.85■□□□□ 0.13
PTPRU-205ENST00000460170 STXBP2Q15833 593 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 NTRK3Q16288 839 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 BBS9Q3SYG4 887 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 CENPUQ71F23 418 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 MICAL1Q8TDZ2 1067 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 NLRP4Q96MN2 994 aa15.85■□□□□ 0.13
PTPRU-205ENST00000460170 EMSYQ7Z589 1322 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 GPR75-ASB3A0A0A6YYF3 556 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 TJP3O95049 919 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 PPP4CP60510 307 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 INTS5Q6P9B9 1019 aaKnown RBP15.84■□□□□ 0.13
PTPRU-205ENST00000460170 LDHDQ86WU2 507 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 REXO1L1PQ8IX06 675 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 SLC16A3O15427 465 aaKnown RBP15.84■□□□□ 0.13
PTPRU-205ENST00000460170 PRPSAP2O60256 369 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 CPP00450 1065 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 CHRNA3P32297 505 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 SNRNP48Q6IEG0 339 aaKnown RBP15.84■□□□□ 0.13
PTPRU-205ENST00000460170 TRIM42Q8IWZ5 723 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 THNSL1Q8IYQ7 743 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 C7orf31Q8N865 590 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 EFCC1Q9HA90 598 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 PFASO15067 1338 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 TXNDC9O14530 226 aa15.84■□□□□ 0.13
PTPRU-205ENST00000460170 EDRF1Q3B7T1 1238 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms