RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MTERF2Q49AM1 385 aa25.61■■□□□ 1.69
PTPN4-207ENST00000460162 SPOUT1Q5T280 376 aaKnown RBP25.61■■□□□ 1.69
PTPN4-207ENST00000460162 FAM102BQ5T8I3 360 aa25.61■■□□□ 1.69
PTPN4-207ENST00000460162 EPHX3Q9H6B9 360 aa25.61■■□□□ 1.69
PTPN4-207ENST00000460162 PRKAG3Q9UGI9 489 aa25.61■■□□□ 1.69
PTPN4-207ENST00000460162 TBX10O75333 385 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 FGFR1P11362 822 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 CDC42EP1Q00587 391 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 PPP2R5CQ13362 524 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 PPP4R3AQ6IN85 833 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 NLRP7Q8WX94 980 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 WASF1Q92558 559 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 KHSRPQ92945 711 aaKnown RBP eCLIP25.6■■□□□ 1.692e-6■■■■□ 22.3
PTPN4-207ENST00000460162 FAM20AQ96MK3 541 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 CEP89Q96ST8 783 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 NAP1L4Q99733 375 aaKnown RBP25.6■■□□□ 1.69
PTPN4-207ENST00000460162 TMEM117Q9H0C3 514 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 KCNMB3Q9NPA1 279 aa25.6■■□□□ 1.69
PTPN4-207ENST00000460162 STBD1O95210 358 aa25.59■■□□□ 1.69
PTPN4-207ENST00000460162 LAG3P18627 525 aa25.59■■□□□ 1.69
PTPN4-207ENST00000460162 SSTR3P32745 418 aaPredicted RBP25.59■■□□□ 1.69
PTPN4-207ENST00000460162 IRS1P35568 1242 aa25.59■■□□□ 1.69
PTPN4-207ENST00000460162 AK2P54819 239 aa25.59■■□□□ 1.69
PTPN4-207ENST00000460162 PSMC5P62195 406 aa25.59■■□□□ 1.69
PTPN4-207ENST00000460162 VAV3Q9UKW4 847 aa25.59■■□□□ 1.69
PTPN4-207ENST00000460162 IGKV6-21A0A0C4DH24 114 aa25.58■■□□□ 1.69
PTPN4-207ENST00000460162 GTF2F1P35269 517 aaKnown RBP eCLIP25.58■■□□□ 1.69
PTPN4-207ENST00000460162 DNM2P50570 870 aa25.58■■□□□ 1.69
PTPN4-207ENST00000460162 DLX2Q07687 328 aaPredicted RBP25.58■■□□□ 1.69
PTPN4-207ENST00000460162 ADGRD2Q7Z7M1 963 aa25.58■■□□□ 1.69
PTPN4-207ENST00000460162 LRRC43Q8N309 656 aa25.58■■□□□ 1.69
PTPN4-207ENST00000460162 COLGALT1Q8NBJ5 622 aa25.58■■□□□ 1.69
PTPN4-207ENST00000460162 ZNF668Q96K58 619 aaPredicted RBP25.58■■□□□ 1.69
PTPN4-207ENST00000460162 TYW1Q9NV66 732 aaKnown RBP25.58■■□□□ 1.69
PTPN4-207ENST00000460162 TMEM150BA6NC51 233 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 PI4K2BG5E9Z4 385 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 TBX3O15119 743 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 DKC1O60832 514 aaKnown RBP eCLIP25.57■■□□□ 1.684e-16■■■■■ 70.3
PTPN4-207ENST00000460162 EIF5BO60841 1220 aaKnown RBP25.57■■□□□ 1.68
PTPN4-207ENST00000460162 FGF18O76093 207 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 CTDNEP1O95476 244 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 ZP2Q05996 745 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 ADAM15Q13444 863 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 DRP2Q13474 957 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 SMAD4Q13485 552 aaKnown RBP25.57■■□□□ 1.68
PTPN4-207ENST00000460162 PIK3AP1Q6ZUJ8 805 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 ZNF410Q86VK4 478 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 ECHDC2Q86YB7 292 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 THNSL1Q8IYQ7 743 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 ABI1Q8IZP0 508 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 EFHBQ8N7U6 833 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 JPH2Q9BR39 696 aaPredicted RBP25.57■■□□□ 1.68
PTPN4-207ENST00000460162 GCOM2Q9BZD3 368 aaPredicted RBP25.57■■□□□ 1.68
PTPN4-207ENST00000460162 IGFLR1Q9H665 355 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 CWH43Q9H720 699 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 TLR9Q9NR96 1032 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 DACT1Q9NYF0 836 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 ORC3Q9UBD5 711 aaPredicted RBP25.57■■□□□ 1.68
PTPN4-207ENST00000460162 HCSTQ9UBK5 93 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 ARID2Q68CP9 1835 aa25.57■■□□□ 1.68
PTPN4-207ENST00000460162 FSD2A1L4K1 749 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 LINC01565O15544 149 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 MAFO75444 373 aaPredicted RBP25.56■■□□□ 1.68
PTPN4-207ENST00000460162 NDUFV1P49821 464 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 SMAD2Q15796 467 aaKnown RBP25.56■■□□□ 1.68
PTPN4-207ENST00000460162 TMEM31Q5JXX7 168 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 ANO5Q75V66 913 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 ADHFE1Q8IWW8 467 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 GJB4Q9NTQ9 266 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 RNF19AQ9NV58 838 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 CD207Q9UJ71 328 aa25.56■■□□□ 1.68
PTPN4-207ENST00000460162 EML1O00423 815 aa25.55■■□□□ 1.68
PTPN4-207ENST00000460162 MBTPS2O43462 519 aa25.55■■□□□ 1.68
PTPN4-207ENST00000460162 CCNT1O60563 726 aaKnown RBP25.55■■□□□ 1.68
PTPN4-207ENST00000460162 SFPQP23246 707 aaKnown RBP eCLIP25.55■■□□□ 1.68
PTPN4-207ENST00000460162 QARSP47897 775 aaKnown RBP25.55■■□□□ 1.68
PTPN4-207ENST00000460162 OXER1Q8TDS5 423 aa25.55■■□□□ 1.68
PTPN4-207ENST00000460162 GTF3C6Q969F1 213 aa25.55■■□□□ 1.68
PTPN4-207ENST00000460162 CASD1Q96PB1 797 aa25.55■■□□□ 1.68
PTPN4-207ENST00000460162 LZTS1Q9Y250 596 aa25.55■■□□□ 1.68
PTPN4-207ENST00000460162 PPME1Q9Y570 386 aa25.55■■□□□ 1.68
PTPN4-207ENST00000460162 A0A0U1RQF3 1178 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 DDX11L8A8MPP1 907 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 GPR37L1O60883 481 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 PPM1AP35813 382 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 NRIP1P48552 1158 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 CLUL1Q15846 466 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 PDE12Q6L8Q7 609 aaKnown RBP25.54■■□□□ 1.68
PTPN4-207ENST00000460162 MSLNLQ96KJ4 702 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 POP1Q99575 1024 aaKnown RBP25.54■■□□□ 1.68
PTPN4-207ENST00000460162 SH2D3AQ9BRG2 576 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 LRFN3Q9BTN0 628 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 INO80BQ9C086 356 aaPredicted RBP25.54■■□□□ 1.68
PTPN4-207ENST00000460162 BRMS1Q9HCU9 246 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 CYP26B1Q9NR63 512 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 CHST12Q9NRB3 414 aa25.54■■□□□ 1.68
PTPN4-207ENST00000460162 A0A087WZ62 844 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 C19orf67A6NJJ6 358 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 EOMESO95936 686 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 P4HBP07237 508 aaKnown RBP25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms