RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CCNT1O60563 726 aaKnown RBP11.23□□□□□ -0.61
HDLBP-228ENST00000459788 EOMESO95936 686 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 VTNP04004 478 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 SKIP12755 728 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 DARSP14868 501 aaKnown RBP11.23□□□□□ -0.61
HDLBP-228ENST00000459788 RFC5P40937 340 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 CLCN3P51790 818 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 NLRP11P59045 1033 aaKnown RBP11.23□□□□□ -0.61
HDLBP-228ENST00000459788 PCBP1Q15365 356 aaKnown RBP eCLIP11.23□□□□□ -0.615e-6■□□□□ 8.9
HDLBP-228ENST00000459788 UGCGQ16739 394 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 PDE12Q6L8Q7 609 aaKnown RBP11.23□□□□□ -0.61
HDLBP-228ENST00000459788 PIK3AP1Q6ZUJ8 805 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 OTUD6AQ7L8S5 288 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 C4orf19Q8IY42 314 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 PABPC5Q96DU9 382 aaKnown RBP11.23□□□□□ -0.61
HDLBP-228ENST00000459788 OSMRQ99650 979 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 GCOM2Q9BZD3 368 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-228ENST00000459788 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 ATP6V0A4Q9HBG4 840 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-228ENST00000459788 SEPT9Q9UHD8 586 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-228ENST00000459788 PCDHB12Q9Y5F1 795 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 ASAP2O43150 1006 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 MARCH6O60337 910 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 LYPLA2O95372 231 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 SFPQP23246 707 aaKnown RBP eCLIP11.22□□□□□ -0.61
HDLBP-228ENST00000459788 HMGN5P82970 282 aaKnown RBP11.22□□□□□ -0.61
HDLBP-228ENST00000459788 TFF2Q03403 129 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 SAFBQ15424 915 aaKnown RBP eCLIP11.22□□□□□ -0.61
HDLBP-228ENST00000459788 TMEM266Q2M3C6 531 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 ANO5Q75V66 913 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 SLC7A3Q8WY07 619 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 HAS1Q92839 578 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 TMEM117Q9H0C3 514 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 ZSWIM4Q9H7M6 989 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 CYP26B1Q9NR63 512 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 PLAGL2Q9UPG8 496 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 GINS2Q9Y248 185 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 LZTS1Q9Y250 596 aa11.22□□□□□ -0.61
HDLBP-228ENST00000459788 MRPL42Q9Y6G3 142 aaKnown RBP11.22□□□□□ -0.61
HDLBP-228ENST00000459788 A0A0U1RQF3 1178 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 DDX11L8A8MPP1 907 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 EML1O00423 815 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 MGEA5O60502 916 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.61
HDLBP-228ENST00000459788 LAG3P18627 525 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 RAB27AP51159 221 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 POU5F1BQ06416 359 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 MTERF2Q49AM1 385 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 LRRC71Q8N4P6 559 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 TCP11Q8WWU5 503 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 MRPL9Q9BYD2 267 aaKnown RBP11.21□□□□□ -0.61
HDLBP-228ENST00000459788 DHX33Q9H6R0 707 aaKnown RBP11.21□□□□□ -0.61
HDLBP-228ENST00000459788 PRKAG3Q9UGI9 489 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 PCDHA12Q9UN75 941 aa11.21□□□□□ -0.61
HDLBP-228ENST00000459788 GRM6O15303 877 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 ZNF623O75123 536 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 LARGE1O95461 756 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 PPM1AP35813 382 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 RBM25P49756 843 aaKnown RBP11.2□□□□□ -0.62
HDLBP-228ENST00000459788 KCNQ1P51787 676 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 PLCB3Q01970 1234 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 TCEAL5Q5H9L2 206 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 SRGAP1Q7Z6B7 1085 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 ECHDC2Q86YB7 292 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 DIS3L2Q8IYB7 885 aaKnown RBP11.2□□□□□ -0.62
HDLBP-228ENST00000459788 LRRC43Q8N309 656 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 SPPL3Q8TCT6 385 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 GJA10Q969M2 543 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 SCLT1Q96NL6 688 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 LXNQ9BS40 222 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-228ENST00000459788 ANKEF1Q9NU02 776 aa11.2□□□□□ -0.62
HDLBP-228ENST00000459788 SUCLA2Q9P2R7 463 aaPredicted RBP11.2□□□□□ -0.62
HDLBP-228ENST00000459788 TDRD15B5MCY1 1934 aaKnown RBP11.19□□□□□ -0.62
HDLBP-228ENST00000459788 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 TBKBP1A7MCY6 615 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 BTBD18B2RXH4 712 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 NEMFO60524 1076 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 ITGB1P05556 798 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 MUTP22033 750 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 YWHABP31946 246 aaKnown RBP11.19□□□□□ -0.62
HDLBP-228ENST00000459788 TRAPPC10P48553 1259 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 POLGP54098 1239 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-228ENST00000459788 NR5A1Q13285 461 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 CAMK1Q14012 370 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 MXD4Q14582 209 aaPredicted RBP11.19□□□□□ -0.62
HDLBP-228ENST00000459788 CALCRLQ16602 461 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
HDLBP-228ENST00000459788 ZNF598Q86UK7 904 aaKnown RBP11.19□□□□□ -0.62
HDLBP-228ENST00000459788 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 KLHL23Q8NBE8 558 aa11.19□□□□□ -0.62
HDLBP-228ENST00000459788 PSPC1Q8WXF1 523 aaKnown RBP11.19□□□□□ -0.62
HDLBP-228ENST00000459788 CEP170P1Q96L14 293 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms