RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 IFFO1Q0D2I5 559 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 EPHA7Q15375 998 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 SNCBQ16143 134 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 PPP2R5EQ16537 467 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 ARSHQ5FYA8 562 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 HERC4Q5GLZ8 1057 aaPredicted RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 GKAP1Q5VSY0 366 aaPredicted RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 H2AFVQ71UI9 128 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 EPM2AIP1Q7L775 607 aaPredicted RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 FAM228AQ86W67 206 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 GPBP1Q86WP2 473 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 PARP9Q8IXQ6 854 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 LINC00116Q8NCU8 138 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 OLIG1Q8TAK6 271 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 ATP8B4Q8TF62 1192 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 MAGOHBQ96A72 148 aaKnown RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 SPAG5Q96R06 1193 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 MXD3Q9BW11 206 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 GOLPH3Q9H4A6 298 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 SIX2Q9NPC8 291 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 ARMCX3Q9UH62 379 aaPredicted RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 KIAA1024Q9UPX6 916 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 NCANO14594 1321 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 IGKV6D-41A0A0C4DH26 115 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 C2orf72A6NCS6 295 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 DCDC2CA8MYV0 355 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 F8W031 263 aaPredicted RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 PDXKO00764 312 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 TTI1O43156 1089 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 MGRN1O60291 552 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 NUDT17P0C025 328 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 BTDP43251 543 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 DHX9Q08211 1270 aaKnown RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 ADCY2Q08462 1091 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 ENOX2Q16206 610 aaKnown RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 EXOC3L4Q17RC7 722 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 BMT2Q1RMZ1 405 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 ODF2Q5BJF6 829 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 VPS36Q86VN1 386 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 KLHL23Q8NBE8 558 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 SLC30A5Q8TAD4 765 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 CUL5Q93034 780 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 MBOAT7Q96N66 472 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 FAM129AQ9BZQ8 928 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 RAB17Q9H0T7 212 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 JMJD4Q9H9V9 463 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 KCNMB3Q9NPA1 279 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 MTMR4Q9NYA4 1195 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 UTP11Q9Y3A2 253 aaKnown RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 SPATA31A1Q5TZJ5 1347 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 FRMPD2Q68DX3 1309 aaPredicted RBP9.23□□□□□ -0.93
VPS50-208ENST00000458707 BTAF1O14981 1849 aa9.23□□□□□ -0.93
VPS50-208ENST00000458707 LTBP1Q14766 1721 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 NPHP3-ACAD11A0A0J9YXS1 232 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 DDX3XO00571 662 aaKnown RBP eCLIP9.22□□□□□ -0.93
VPS50-208ENST00000458707 SLC16A3O15427 465 aaKnown RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 PPP1R11O60927 126 aaPredicted RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 XRCC5P13010 732 aaKnown RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 PAX7P23759 505 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 HOXD13P35453 343 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 MRPL12P52815 198 aaKnown RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 DRG2P55039 364 aaKnown RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 RHBDL3P58872 404 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 PTENP60484 403 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 UBE2SQ16763 222 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 KNOP1Q1ED39 458 aaKnown RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 KRT71Q3SY84 523 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 DUPD1Q68J44 220 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 BICDL1Q6ZP65 573 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 ZNF804AQ7Z570 1209 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 HOOK3Q86VS8 718 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 TEX11Q8IYF3 940 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 CHMP6Q96FZ7 201 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 PGM2Q96G03 612 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 ZNF317Q96PQ6 595 aaPredicted RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 XPO6Q96QU8 1125 aaKnown RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 FMO2Q99518 471 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 DHX36Q9H2U1 1008 aaKnown RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 EPB41L4BQ9H329 900 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 SUDS3Q9H7L9 328 aaPredicted RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 METTL14Q9HCE5 456 aaKnown RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 ZDHHC18Q9NUE0 388 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 ETAA1Q9NY74 926 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 NARFQ9UHQ1 456 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 AHDC1Q5TGY3 1603 aaPredicted RBP9.22□□□□□ -0.93
VPS50-208ENST00000458707 SIPA1L1O43166 1804 aa9.22□□□□□ -0.93
VPS50-208ENST00000458707 CYP3A7-CYP3A51PA0A087WV96 503 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 POTECB2RU33 542 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 DDX3YO15523 660 aaKnown RBP9.21□□□□□ -0.93
VPS50-208ENST00000458707 ASAP2O43150 1006 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 PPIP5K2O43314 1243 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 SSBP05455 408 aaKnown RBP eCLIP9.21□□□□□ -0.93
VPS50-208ENST00000458707 GSTA1P08263 222 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 FERP16591 822 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 CYP3A7P24462 503 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 MMP13P45452 471 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 CASP5P51878 434 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 PPATQ06203 517 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 ZNF543Q08ER8 600 aa9.21□□□□□ -0.93
VPS50-208ENST00000458707 GIT2Q14161 759 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms