RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TTYH1Q9H313 450 aaPredicted RBP9.89□□□□□ -0.83
VPS50-207ENST00000458530 ZHX3Q9H4I2 956 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 THAP9Q9H5L6 903 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 ANKEF1Q9NU02 776 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 FANCLQ9NW38 375 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 IMPACTQ9P2X3 320 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 DIS3Q9Y2L1 958 aaKnown RBP9.89□□□□□ -0.83
VPS50-207ENST00000458530 PCDHGA10Q9Y5H3 936 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 SOWAHBA6NEL2 793 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 SLC15A5A6NIM6 579 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 ZNF18P17022 549 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 EEF1GP26641 437 aaKnown RBP9.88□□□□□ -0.83
VPS50-207ENST00000458530 CCND3P30281 292 aaPredicted RBP9.88□□□□□ -0.83
VPS50-207ENST00000458530 YWHABP31946 246 aaKnown RBP9.88□□□□□ -0.83
VPS50-207ENST00000458530 ABCD1P33897 745 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 STX17P56962 302 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 SMAD3P84022 425 aaKnown RBP9.88□□□□□ -0.83
VPS50-207ENST00000458530 GIT2Q14161 759 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 TTLL4Q14679 1199 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 Q3C1V9 767 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 RINT1Q6NUQ1 792 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 SEPT14Q6ZU15 432 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 PLEKHH3Q7Z736 793 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 MSL3Q8N5Y2 521 aaKnown RBP9.88□□□□□ -0.83
VPS50-207ENST00000458530 MORC4Q8TE76 937 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 SCFD2Q8WU76 684 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 DRC1Q96MC2 740 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 FAM161BQ96MY7 647 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 PURBQ96QR8 312 aaKnown RBP9.88□□□□□ -0.83
VPS50-207ENST00000458530 REEP2Q9BRK0 252 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 PARVGQ9HBI0 331 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 VTA1Q9NP79 307 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 SLC39A2Q9NP94 309 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 OLFML3Q9NRN5 406 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 IFNKQ9P0W0 207 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 KCNG1Q9UIX4 513 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 FRMPD3Q5JV73 1810 aa9.88□□□□□ -0.83
VPS50-207ENST00000458530 IGSF9BQ9UPX0 1349 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 BACH1O14867 736 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 EIF3DO15371 548 aaKnown RBP eCLIP9.87□□□□□ -0.83
VPS50-207ENST00000458530 HRO43593 1189 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 ATP9AO75110 1047 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 RGS20O76081 388 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 PGK2P07205 417 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 SUPT20HL2P0C7V6 817 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 CYP2B6P20813 491 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 ADORA2AP29274 412 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 ACTR2P61160 394 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 PSMC6P62333 389 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 STK4Q13043 487 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 CCL14Q16627 93 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 CDKAL1Q5VV42 579 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 CENPPQ6IPU0 288 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 METTL7BQ6UX53 244 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 C1orf186Q6ZWK4 172 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 CSGALNACT2Q8N6G5 542 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 KIAA0895Q8NCT3 520 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 PIGOQ8TEQ8 1089 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 FAM167AQ96KS9 214 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 XPO4Q9C0E2 1151 aaKnown RBP9.87□□□□□ -0.83
VPS50-207ENST00000458530 PORCNQ9H237 461 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 LARSQ9P2J5 1176 aaKnown RBP9.87□□□□□ -0.83
VPS50-207ENST00000458530 PPME1Q9Y570 386 aa9.87□□□□□ -0.83
VPS50-207ENST00000458530 ASTN1O14525 1302 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 TMEM265A0A087WTH1 108 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 KCNJ18B7U540 433 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 TK2O00142 265 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 NOP56O00567 594 aaKnown RBP9.86□□□□□ -0.83
VPS50-207ENST00000458530 CALUO43852 315 aaPredicted RBP9.86□□□□□ -0.83
VPS50-207ENST00000458530 GNA14O95837 355 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 CCNE2O96020 404 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 TPM1P09493 284 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 MAPTP10636 758 aaKnown RBP9.86□□□□□ -0.83
VPS50-207ENST00000458530 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
VPS50-207ENST00000458530 COL9A1P20849 921 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 SCP2P22307 547 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 UBA1P22314 1058 aaKnown RBP9.86□□□□□ -0.83
VPS50-207ENST00000458530 MSNP26038 577 aaKnown RBP9.86□□□□□ -0.83
VPS50-207ENST00000458530 RARRES1P49788 294 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 ZNF131P52739 623 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 GRB14Q14449 540 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 KCNJ12Q14500 433 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 SNX17Q15036 470 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 ZNF792Q3KQV3 632 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 ARSHQ5FYA8 562 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 XKR3Q5GH77 459 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 TTI2Q6NXR4 508 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 PADI6Q6TGC4 694 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 GPR142Q7Z601 462 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 DPP9Q86TI2 863 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 SFR1Q86XK3 245 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 EXOC8Q8IYI6 725 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 MYCT1Q8N699 235 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 SPC24Q8NBT2 197 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 CCDC150Q8NCX0 1101 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 MCPH1Q8NEM0 835 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 KAT6AQ92794 2004 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 CEP63Q96MT8 703 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 APBA2Q99767 749 aa9.86□□□□□ -0.83
VPS50-207ENST00000458530 RUSC1Q9BVN2 902 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms