RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 YIPF3Q9GZM5 350 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 M0QYV0 167 aa21.02■□□□□ 0.95
SNX27-204ENST00000458013 IMPG1Q17R60 797 aa21.02■□□□□ 0.95
SNX27-204ENST00000458013 PANX2Q96RD6 677 aa21.02■□□□□ 0.95
SNX27-204ENST00000458013 NR1H4Q96RI1 486 aaPredicted RBP21.02■□□□□ 0.95
SNX27-204ENST00000458013 C11orf70Q9BRQ4 267 aa21.02■□□□□ 0.95
SNX27-204ENST00000458013 ECT2Q9H8V3 914 aa21.02■□□□□ 0.95
SNX27-204ENST00000458013 ABHD10Q9NUJ1 306 aa21.02■□□□□ 0.95
SNX27-204ENST00000458013 TJP3O95049 919 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 MCF2P10911 925 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 C1orf146Q5VVC0 180 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 ZNF233A6NK53 670 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 USP17L10C9JJH3 530 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 DIAPH2O60879 1101 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 CHEK2O96017 543 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 PTPN12Q05209 780 aaKnown RBP21.01■□□□□ 0.95
SNX27-204ENST00000458013 LMBRD2Q68DH5 695 aaPredicted RBP21.01■□□□□ 0.95
SNX27-204ENST00000458013 CATSPER3Q86XQ3 398 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 ENOX1Q8TC92 643 aaKnown RBP21.01■□□□□ 0.95
SNX27-204ENST00000458013 KIF17Q9P2E2 1029 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 HLA-DPA1P20036 260 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 CCDC17Q96LX7 622 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 DNAJC8O75937 253 aaPredicted RBP21.01■□□□□ 0.95
SNX27-204ENST00000458013 SEC24DO94855 1032 aaPredicted RBP21.01■□□□□ 0.95
SNX27-204ENST00000458013 MTMR1Q13613 665 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 CATSPER4Q7RTX7 472 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 ADAM22Q9P0K1 906 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 WARS2Q9UGM6 360 aaKnown RBP21.01■□□□□ 0.95
SNX27-204ENST00000458013 WDR17Q8IZU2 1322 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 CFAP69A5D8W1 941 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 SASH1O94885 1247 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 ELF1P32519 619 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 C16orf87Q6PH81 154 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 ARMC9Q7Z3E5 817 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 TTC25Q96NG3 672 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 SERPINI1Q99574 410 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 ADA2Q9NZK5 511 aa21.01■□□□□ 0.95
SNX27-204ENST00000458013 POTEB3A0JP26 581 aa21■□□□□ 0.95
SNX27-204ENST00000458013 POTECB2RU33 542 aa21■□□□□ 0.95
SNX27-204ENST00000458013 ATXN3P54252 364 aaPredicted RBP21■□□□□ 0.95
SNX27-204ENST00000458013 POTEBQ6S5H4 581 aa21■□□□□ 0.95
SNX27-204ENST00000458013 ZNF467Q7Z7K2 595 aaPredicted RBP21■□□□□ 0.95
SNX27-204ENST00000458013 ZNF513Q8N8E2 541 aaPredicted RBP21■□□□□ 0.95
SNX27-204ENST00000458013 CCDC78A2IDD5 438 aa21■□□□□ 0.95
SNX27-204ENST00000458013 ZNF699Q32M78 642 aa21■□□□□ 0.95
SNX27-204ENST00000458013 ANKMY2Q8IV38 441 aa21■□□□□ 0.95
SNX27-204ENST00000458013 GCNAQ96QF7 691 aa21■□□□□ 0.95
SNX27-204ENST00000458013 MRFAP1Q9Y605 127 aa21■□□□□ 0.95
SNX27-204ENST00000458013 DFFAO00273 331 aa21■□□□□ 0.95
SNX27-204ENST00000458013 PNMA6AP0CW24 399 aaPredicted RBP21■□□□□ 0.95
SNX27-204ENST00000458013 TAC1P20366 129 aa21■□□□□ 0.95
SNX27-204ENST00000458013 C1orf54Q8WWF1 131 aa21■□□□□ 0.95
SNX27-204ENST00000458013 COG4Q9H9E3 785 aa21■□□□□ 0.95
SNX27-204ENST00000458013 PI4KBQ9UBF8 816 aa21■□□□□ 0.95
SNX27-204ENST00000458013 LCP1P13796 627 aa21■□□□□ 0.95
SNX27-204ENST00000458013 ADCY2Q08462 1091 aa21■□□□□ 0.95
SNX27-204ENST00000458013 ALS2CLQ60I27 953 aa21■□□□□ 0.95
SNX27-204ENST00000458013 CC2D2BQ6DHV5 1058 aa21■□□□□ 0.95
SNX27-204ENST00000458013 TAF1BQ53T94 588 aaPredicted RBP21■□□□□ 0.95
SNX27-204ENST00000458013 TOB2Q14106 344 aaPredicted RBP20.99■□□□□ 0.95
SNX27-204ENST00000458013 ACCSLQ4AC99 568 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 TMC4Q7Z404 712 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 KLC2Q9H0B6 622 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 GCC2Q8IWJ2 1684 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 SYCE1LA8MT33 242 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 KPNA2P52292 529 aaKnown RBP20.99■□□□□ 0.95
SNX27-204ENST00000458013 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.99■□□□□ 0.95
SNX27-204ENST00000458013 POTEFA5A3E0 1075 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 FOXN1O15353 648 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 POTEIP0CG38 1075 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 GPC3P51654 580 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 POTEGQ6S5H5 508 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 POTEEQ6S8J3 1075 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 PPM1NQ8N819 430 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 ZBED2Q9BTP6 218 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 RCOR1Q9UKL0 485 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 PDIK1LQ8N165 341 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 CCDC124Q96CT7 223 aaKnown RBP20.99■□□□□ 0.95
SNX27-204ENST00000458013 TRIM15Q9C019 465 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 PCP11498 1178 aaKnown RBP20.99■□□□□ 0.95
SNX27-204ENST00000458013 FGFR4P22455 802 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 PMS2P54278 862 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 COASYQ13057 564 aa20.99■□□□□ 0.95
SNX27-204ENST00000458013 SIRT2Q8IXJ6 389 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 UBE4BO95155 1302 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 A0A087WUV0 522 aaPredicted RBP20.98■□□□□ 0.95
SNX27-204ENST00000458013 GCFC2P16383 781 aaKnown RBP20.98■□□□□ 0.95
SNX27-204ENST00000458013 TBCCQ15814 346 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 ZNF568Q3ZCX4 644 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 TRIM55Q9BYV6 548 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 GOLGA8RI6L899 631 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 SKIP12755 728 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 SPARCL1Q14515 664 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 ARMCX2Q7L311 632 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 ST13P4Q8IZP2 240 aaPredicted RBP20.98■□□□□ 0.95
SNX27-204ENST00000458013 CENPKQ9BS16 269 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 UBA6A0AVT1 1052 aaPredicted RBP20.98■□□□□ 0.95
SNX27-204ENST00000458013 NR3C1P04150 777 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 GPS1Q13098 491 aa20.98■□□□□ 0.95
SNX27-204ENST00000458013 ACBD5Q5T8D3 534 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms