RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 RIC8AQ9NPQ8 531 aa16.32■□□□□ 0.2
UPF3AP2-201ENST00000457924 ZNF302Q9NR11 478 aa16.32■□□□□ 0.2
UPF3AP2-201ENST00000457924 FAM86C1Q9NVL1 165 aa16.32■□□□□ 0.2
UPF3AP2-201ENST00000457924 HCSTQ9UBK5 93 aa16.32■□□□□ 0.2
UPF3AP2-201ENST00000457924 MYH9P35579 1960 aaKnown RBP16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 CCNE2O96020 404 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 ADCY7P51828 1080 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 FAM189BP81408 668 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 KRT17Q04695 432 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 APOBRQ0VD83 1088 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 KCNC3Q14003 757 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 PPP1R18Q6NYC8 613 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 MIS18BP1Q6P0N0 1132 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 ABHD15Q6UXT9 468 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 MICU3Q86XE3 530 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 ZNF687Q8N1G0 1237 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 PPP1R16BQ96T49 567 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 OSMRQ99650 979 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 APOL5Q9BWW9 433 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 NGRNQ9NPE2 291 aaKnown RBP16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 NR2E1Q9Y466 385 aa16.31■□□□□ 0.2
UPF3AP2-201ENST00000457924 HOXA2O43364 376 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 HOXB8P17481 243 aaPredicted RBP16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 SP100P23497 879 aaPredicted RBP16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 NBR1Q14596 966 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 KIZQ2M2Z5 673 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 TYW1BQ6NUM6 668 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 SYCE2Q6PIF2 218 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 NIPA1Q7RTP0 329 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 FAM228AQ86W67 206 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 CCDC60Q8IWA6 550 aaPredicted RBP16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 CKAP2LQ8IYA6 745 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 ZDHHC16Q969W1 377 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 RIPOR3Q96MK2 946 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 TMEM117Q9H0C3 514 aa16.3■□□□□ 0.2
UPF3AP2-201ENST00000457924 SMCO2A6NFE2 343 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 HIDE1A8MVS5 230 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 ZBTB42B2RXF5 422 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 PPM1AP35813 382 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 SREBF1P36956 1147 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 AP3B2Q13367 1082 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 SWSAP1Q6NVH7 229 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 KCNT2Q6UVM3 1135 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 SGMS1Q86VZ5 419 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 METTL13Q8N6R0 699 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 CASP10Q92851 521 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 ZNF558Q96NG5 402 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 LRRC2Q9BYS8 371 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 GLT8D2Q9H1C3 349 aa16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 RBM28Q9NW13 759 aaKnown RBP16.29■□□□□ 0.2
UPF3AP2-201ENST00000457924 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 H0Y858 1186 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 SLC27A2O14975 620 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 GPR32O75388 356 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 C22orf31O95567 290 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 VTNP04004 478 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 ZSCAN20P17040 1043 aaPredicted RBP16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 MTMR3Q13615 1198 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 COL9A3Q14050 684 aaPredicted RBP16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 DSC3Q14574 896 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 CES5AQ6NT32 575 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 LRRC55Q6ZSA7 311 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 TMC7Q7Z402 723 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 PLA2G4DQ86XP0 818 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 KREMEN2Q8NCW0 462 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 NECTIN4Q96NY8 510 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 CASD1Q96PB1 797 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 ADAM33Q9BZ11 813 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 CEP131Q9UPN4 1083 aa16.28■□□□□ 0.2
UPF3AP2-201ENST00000457924 MYO10Q9HD67 2058 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 PDGFBP01127 241 aaPredicted RBP16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 ATP4AP20648 1035 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 ITIH3Q06033 890 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 SMC1AQ14683 1233 aaKnown RBP16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 CREB3L3Q68CJ9 461 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 TRMT1LQ7Z2T5 733 aaKnown RBP16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 UBALD2Q8IYN6 164 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 LSG1Q9H089 658 aaKnown RBP16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 ADAM7Q9H2U9 754 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 SPG21Q9NZD8 308 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 TCEAL9Q9UHQ7 104 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 SORCS3Q9UPU3 1222 aa16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 MAFBQ9Y5Q3 323 aaPredicted RBP16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 V9GY48 417 aaPredicted RBP16.27■□□□□ 0.2
UPF3AP2-201ENST00000457924 CACNA1HO95180 2353 aa16.27■□□□□ 0.19
UPF3AP2-201ENST00000457924 FAM86B1E9PN63 330 aa16.26■□□□□ 0.19
UPF3AP2-201ENST00000457924 IPO5O00410 1097 aaKnown RBP16.26■□□□□ 0.19
UPF3AP2-201ENST00000457924 MAGEB2O15479 319 aa16.26■□□□□ 0.19
UPF3AP2-201ENST00000457924 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
UPF3AP2-201ENST00000457924 FAM86B2P0C5J1 330 aa16.26■□□□□ 0.19
UPF3AP2-201ENST00000457924 PBX3P40426 434 aa16.26■□□□□ 0.19
UPF3AP2-201ENST00000457924 CLK2P49760 499 aaKnown RBP16.26■□□□□ 0.19
UPF3AP2-201ENST00000457924 BMS1Q14692 1282 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms