RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 ABCG4Q9H172 646 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 ELAC1Q9H777 363 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 IFT22Q9H7X7 185 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 RSAD1Q9HA92 442 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 PLEKHA5Q9HAU0 1116 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 BRMS1Q9HCU9 246 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 PDLIM7Q9NR12 457 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TOPORSQ9NS56 1045 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 ARGLU1Q9NWB6 273 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 STAP2Q9UGK3 403 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 ZNF112Q9UJU3 913 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 RABL2BQ9UNT1 228 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 DNM3Q9UQ16 869 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 PRRG2O14669 202 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 HTATSF1O43719 755 aaKnown RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 PRKD3O94806 890 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 PRAMEF1O95521 474 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 CPP00450 1065 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 MYBL2P10244 700 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 PYGMP11217 842 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 VCAM1P19320 739 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 GRK2P25098 689 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 RPL10P27635 214 aaKnown RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 POLR2BP30876 1174 aaKnown RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 SSR1P43307 286 aaKnown RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 TNNT2P45379 298 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 ID4P47928 161 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 CLCQ05315 142 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 BTKQ06187 659 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 CACNB2Q08289 660 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 PPP2R5CQ13362 524 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 SNW1Q13573 536 aaKnown RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 PLCB4Q15147 1175 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 E2F5Q15329 346 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 PCBP2Q15366 365 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 SLC45A4Q5BKX6 768 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 ITPRIPL1Q6GPH6 555 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 B3GNT9Q6UX72 402 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 RTL10Q7L3V2 364 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 RASGRP2Q7LDG7 609 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 NLRC3Q7RTR2 1065 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 MILR1Q7Z6M3 343 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 ARHGEF25Q86VW2 580 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 ERC1Q8IUD2 1116 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 ANKRD18AQ8IVF6 992 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 DEPTORQ8TB45 409 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 SLC35G2Q8TBE7 412 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 USP7Q93009 1102 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 SNX21Q969T3 373 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 HIC2Q96JB3 615 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 HHIPL1Q96JK4 782 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 FCRL2Q96LA5 508 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 SEC62Q99442 399 aaKnown RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 NUP88Q99567 741 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 MYLK2Q9H1R3 596 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 EPN3Q9H201 632 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 ATP8A2Q9NTI2 1148 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 DCAF16Q9NXF7 216 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 PRR13Q9NZ81 148 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 SMC3Q9UQE7 1217 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 CRYL1Q9Y2S2 319 aa4.55□□□□□ -1.68
HMGB3P30-201ENST00000457863 TRIM75PA6NK02 468 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 MASP2O00187 686 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 RFXAPO00287 272 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 TNFRSF10CO14798 259 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 CTNND1O60716 968 aaKnown RBP4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 CLEC3AO75596 197 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 HRGP04196 525 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 XPAP23025 273 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 ANP32AP39687 249 aaKnown RBP4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 NEK4P51957 841 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 ERVFRD-1P60508 538 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 CCNG2Q16589 344 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 ZNF385BQ569K4 471 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 HECTD3Q5T447 861 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 ADGRF1Q5T601 910 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 RUFY4Q6ZNE9 571 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 CEP128Q6ZU80 1094 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 SRGAP1Q7Z6B7 1085 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 TMEM151BQ8IW70 566 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 CMTR2Q8IYT2 770 aaKnown RBP4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 MYCT1Q8N699 235 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 ADAMTS18Q8TE60 1221 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 ATG4CQ96DT6 458 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 HSPBAP1Q96EW2 488 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 UBXN10Q96LJ8 280 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 BARD1Q99728 777 aaKnown RBP4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 PDRG1Q9NUG6 133 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 TBK1Q9UHD2 729 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 MBD1Q9UIS9 605 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 CNOT6Q9ULM6 557 aaKnown RBP4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 LRCH1Q9Y2L9 728 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 TMEM98Q9Y2Y6 226 aa4.54□□□□□ -1.68
HMGB3P30-201ENST00000457863 TRBV23-1A0A0A0MS06 115 aa4.53□□□□□ -1.68
HMGB3P30-201ENST00000457863 A6NNZ2 444 aa4.53□□□□□ -1.68
HMGB3P30-201ENST00000457863 IPO5O00410 1097 aaKnown RBP4.53□□□□□ -1.68
HMGB3P30-201ENST00000457863 ZBED1O96006 694 aa4.53□□□□□ -1.68
HMGB3P30-201ENST00000457863 SYPP08247 313 aa4.53□□□□□ -1.68
HMGB3P30-201ENST00000457863 PNLIPP16233 465 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms