RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 CALCRLQ16602 461 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 ANO5Q75V66 913 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 OTUD6AQ7L8S5 288 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 ZNF410Q86VK4 478 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 CCDC83Q8IWF9 413 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 NEK9Q8TD19 979 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 SLC7A3Q8WY07 619 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 GCOM2Q9BZD3 368 aaPredicted RBP20.02■□□□□ 0.8
MSH6-207ENST00000456246 INO80BQ9C086 356 aaPredicted RBP20.02■□□□□ 0.8
MSH6-207ENST00000456246 ATP6V0A4Q9HBG4 840 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 CYP26B1Q9NR63 512 aa20.02■□□□□ 0.8
MSH6-207ENST00000456246 REV3LO60673 3130 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 FAM205CA6NFA0 338 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 GAS2O43903 313 aaKnown RBP20.01■□□□□ 0.79
MSH6-207ENST00000456246 NEMFO60524 1076 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 RFC5P40937 340 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 FAM189BP81408 668 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 SPIRE1Q08AE8 756 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 DSC3Q14574 896 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 NCAPH2Q6IBW4 605 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 ADAMTS19Q8TE59 1207 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 C8orf76Q96K31 380 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 KIF2CQ99661 725 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 LXNQ9BS40 222 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 NSUN3Q9H649 340 aaKnown RBP20.01■□□□□ 0.79
MSH6-207ENST00000456246 ZSWIM4Q9H7M6 989 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 UPF2Q9HAU5 1272 aaKnown RBP20.01■□□□□ 0.79
MSH6-207ENST00000456246 PCDHA12Q9UN75 941 aa20.01■□□□□ 0.79
MSH6-207ENST00000456246 MRPL42Q9Y6G3 142 aaKnown RBP20.01■□□□□ 0.79
MSH6-207ENST00000456246 TFF2Q03403 129 aa20■□□□□ 0.79
MSH6-207ENST00000456246 ORC2Q13416 577 aaPredicted RBP20■□□□□ 0.79
MSH6-207ENST00000456246 RABEP1Q15276 862 aa20■□□□□ 0.79
MSH6-207ENST00000456246 FAM184AQ8NB25 1140 aa20■□□□□ 0.79
MSH6-207ENST00000456246 RSPH1Q8WYR4 309 aa20■□□□□ 0.79
MSH6-207ENST00000456246 CEP170P1Q96L14 293 aa20■□□□□ 0.79
MSH6-207ENST00000456246 UBE2ZQ9H832 354 aaPredicted RBP20■□□□□ 0.79
MSH6-207ENST00000456246 AAASQ9NRG9 546 aa20■□□□□ 0.79
MSH6-207ENST00000456246 DACT1Q9NYF0 836 aa20■□□□□ 0.79
MSH6-207ENST00000456246 SUCLA2Q9P2R7 463 aaPredicted RBP20■□□□□ 0.79
MSH6-207ENST00000456246 TMEM150BA6NC51 233 aa19.99■□□□□ 0.79
MSH6-207ENST00000456246 NCK2O43639 380 aa19.99■□□□□ 0.79
MSH6-207ENST00000456246 SFPQP23246 707 aaKnown RBP eCLIP19.99■□□□□ 0.79
MSH6-207ENST00000456246 YWHABP31946 246 aaKnown RBP19.99■□□□□ 0.79
MSH6-207ENST00000456246 POLGP54098 1239 aaPredicted RBP19.99■□□□□ 0.79
MSH6-207ENST00000456246 CSPP1Q1MSJ5 1256 aa19.99■□□□□ 0.79
MSH6-207ENST00000456246 PAN2Q504Q3 1202 aaKnown RBP19.99■□□□□ 0.79
MSH6-207ENST00000456246 UHRF1Q96T88 793 aaPredicted RBP19.99■□□□□ 0.79
MSH6-207ENST00000456246 FOXP1Q9H334 677 aaPredicted RBP19.99■□□□□ 0.79
MSH6-207ENST00000456246 CHST12Q9NRB3 414 aa19.99■□□□□ 0.79
MSH6-207ENST00000456246 ST18O60284 1047 aa19.98■□□□□ 0.79
MSH6-207ENST00000456246 BMP1P13497 986 aa19.98■□□□□ 0.79
MSH6-207ENST00000456246 FOSBP53539 338 aa19.98■□□□□ 0.79
MSH6-207ENST00000456246 DRP2Q13474 957 aa19.98■□□□□ 0.79
MSH6-207ENST00000456246 PLA2G4FQ68DD2 849 aa19.98■□□□□ 0.79
MSH6-207ENST00000456246 RHPN2Q8IUC4 686 aa19.98■□□□□ 0.79
MSH6-207ENST00000456246 TCP11Q8WWU5 503 aa19.98■□□□□ 0.79
MSH6-207ENST00000456246 PPP2R3CQ969Q6 453 aa19.98■□□□□ 0.79
MSH6-207ENST00000456246 DHX33Q9H6R0 707 aaKnown RBP19.98■□□□□ 0.79
MSH6-207ENST00000456246 TTC12Q9H892 705 aaPredicted RBP19.98■□□□□ 0.79
MSH6-207ENST00000456246 XIRP2A4UGR9 3374 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 FNDC1Q4ZHG4 1894 aaPredicted RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 A0A087WZ62 844 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 TNFRSF10AO00220 468 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 LYPLA2O95372 231 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 IBSPP21815 317 aaPredicted RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 NPEPPSP55786 919 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 SPOUT1Q5T280 376 aaKnown RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 ABI1Q8IZP0 508 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 FBXO18Q8NFZ0 1043 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 PSPC1Q8WXF1 523 aaKnown RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 DYDC2Q96IM9 177 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 EIF2AK1Q9BQI3 630 aaKnown RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 SH2D3AQ9BRG2 576 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 FDXACB1Q9BRP7 624 aaPredicted RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 TRAIPQ9BWF2 469 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 TMEM117Q9H0C3 514 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 RGL1Q9NZL6 768 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 WRAP73Q9P2S5 460 aaPredicted RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 PLAGL2Q9UPG8 496 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 KIF3AQ9Y496 699 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 PCDHB12Q9Y5F1 795 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 SPTBN5Q9NRC6 3674 aaKnown RBP19.97■□□□□ 0.79
MSH6-207ENST00000456246 KIAA1671Q9BY89 1806 aa19.97■□□□□ 0.79
MSH6-207ENST00000456246 A0A0U1RQF3 1178 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 TBKBP1A7MCY6 615 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 GRM6O15303 877 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 EOMESO95936 686 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 SKIP12755 728 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 KCNQ1P51787 676 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 GUCY1B3Q02153 619 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 CYP4A11Q02928 519 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 UBE3AQ05086 875 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 COL19A1Q14993 1142 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 TCEAL5Q5H9L2 206 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 ECHDC2Q86YB7 292 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 PABPC5Q96DU9 382 aaKnown RBP19.96■□□□□ 0.79
MSH6-207ENST00000456246 ZNF668Q96K58 619 aaPredicted RBP19.96■□□□□ 0.79
MSH6-207ENST00000456246 MTMR9Q96QG7 549 aa19.96■□□□□ 0.79
MSH6-207ENST00000456246 COL4A3BPQ9Y5P4 624 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms