RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 KIF3CO14782 793 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 RGS16O15492 202 aaPredicted RBP20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 ANP32DO95626 131 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 CLTAP09496 248 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 RFC4P35249 363 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 NOVP48745 357 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 PPP2R5AQ15172 486 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 SLC15A2Q16348 729 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 HERC4Q5GLZ8 1057 aaPredicted RBP20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 TRAPPC3LQ5T215 181 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 BTNL9Q6UXG8 535 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 TRIM31Q9BZY9 425 aa20.49■□□□□ 0.87
SEMA3B-208ENST00000456210 SPDYE3A6NKU9 549 aa20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 NQO1P15559 274 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 ZNF131P52739 623 aa20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 IRX1P78414 480 aaPredicted RBP20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 PPATQ06203 517 aa20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 LRCH2Q5VUJ6 765 aa20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 TBC1D1Q86TI0 1168 aaPredicted RBP20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 SLC30A5Q8TAD4 765 aa20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 OLIG1Q8TAK6 271 aa20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 ELAC2Q9BQ52 826 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 AZI2Q9H6S1 392 aa20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 NOP53Q9NZM5 478 aaKnown RBP20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 AGAP1Q9UPQ3 857 aa20.48■□□□□ 0.87
SEMA3B-208ENST00000456210 PLA2G4BP0C869 781 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 CYP11B2P19099 503 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 GBP1P32455 592 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 PPP4CP60510 307 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 ZKSCAN8Q15776 578 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 KIAA1755Q5JYT7 1200 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 CHADLQ6NUI6 762 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 PNMA8AQ86V59 439 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 RFFLQ8WZ73 363 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 EYA3Q99504 573 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 PRMT1Q99873 361 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 STMN4Q9H169 189 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 VAT1LQ9HCJ6 419 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 UTRNP46939 3433 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 KIAA0391O15091 583 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 SNX3O60493 162 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 RARAP10276 462 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 FERP16591 822 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 GALCP54803 685 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 NCALDP61601 193 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 KCTD19Q17RG1 926 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 GALNTL6Q49A17 601 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 PPP1R18Q6NYC8 613 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 C16orf86Q6ZW13 317 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 GPBP1Q86WP2 473 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 AGAP11Q8TF27 550 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 ABCF3Q9NUQ8 709 aa20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 DDX25Q9UHL0 483 aaKnown RBP20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 AJAP1Q9UKB5 411 aaPredicted RBP20.47■□□□□ 0.87
SEMA3B-208ENST00000456210 E9PMD0 336 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 ECM2O94769 699 aaPredicted RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 TMEM253P0C7T8 217 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 XRCC5P13010 732 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 PDE6CP51160 858 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 IFI35P80217 286 aaPredicted RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 GRIK3Q13003 919 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 MAPK7Q13164 816 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 PLS1Q14651 629 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 FAM133BQ5BKY9 247 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 JAMLQ86YT9 394 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 GBP7Q8N8V2 638 aaPredicted RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 MXD3Q9BW11 206 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 ANKRD2Q9GZV1 360 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 GOPCQ9HD26 462 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 RASAL2Q9UJF2 1139 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 IRS2Q9Y4H2 1338 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 GTPBP10A4D1E9 387 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 CLK2P49760 499 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 RPS8P62241 208 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 BZW1Q7L1Q6 419 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 LNX1Q8TBB1 728 aaPredicted RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 U2AF1L4Q8WU68 220 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 MTFR1LQ9H019 292 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 ERVK-5Q9HDB9 667 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 STK32BQ9NY57 414 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 GRHL1Q9NZI5 618 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 PPP1R9AQ9ULJ8 1098 aa20.46■□□□□ 0.87
SEMA3B-208ENST00000456210 UBOX5O94941 541 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 BAG3O95817 575 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 VIMP08670 466 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 CCND1P24385 295 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 CDK8P49336 464 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 SLC29A2Q14542 456 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 CNGA2Q16280 664 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 MFSD5Q6N075 450 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 KIRREL3Q8IZU9 778 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 FBXO25Q8TCJ0 367 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 THOC1Q96FV9 657 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 MOV10L1Q9BXT6 1211 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 OSGEPQ9NPF4 335 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 PCDHA12Q9UN75 941 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 KIAA1024Q9UPX6 916 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 L3MBTL1Q9Y468 752 aa20.45■□□□□ 0.86
SEMA3B-208ENST00000456210 NPHP3-ACAD11A0A0J9YXS1 232 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms