RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 NIFKQ9BYG3 293 aaKnown RBP13.43□□□□□ -0.26
PDGFB-204ENST00000455790 LMAN2LQ9H0V9 348 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 C1orf112Q9NSG2 853 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 RNF19AQ9NV58 838 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 WRAP73Q9P2S5 460 aaPredicted RBP13.43□□□□□ -0.26
PDGFB-204ENST00000455790 PCDHB7Q9Y5E2 793 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 WNT7AO00755 349 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 CCNT1O60563 726 aaKnown RBP13.42□□□□□ -0.26
PDGFB-204ENST00000455790 DARSP14868 501 aaKnown RBP13.42□□□□□ -0.26
PDGFB-204ENST00000455790 EIF4BP23588 611 aaKnown RBP13.42□□□□□ -0.26
PDGFB-204ENST00000455790 TMOD1P28289 359 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 LTBRP36941 435 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 PPP2R5CQ13362 524 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 PTCRAQ6ISU1 281 aaPredicted RBP13.42□□□□□ -0.26
PDGFB-204ENST00000455790 ANO5Q75V66 913 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 ADGRD2Q7Z7M1 963 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 SPPL3Q8TCT6 385 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 P2RX5Q93086 422 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 PABPC5Q96DU9 382 aaKnown RBP13.42□□□□□ -0.26
PDGFB-204ENST00000455790 SCLT1Q96NL6 688 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 CLDND1Q9NY35 253 aa13.42□□□□□ -0.26
PDGFB-204ENST00000455790 FNDC1Q4ZHG4 1894 aaPredicted RBP13.42□□□□□ -0.26
PDGFB-204ENST00000455790 IGKV6-21A0A0C4DH24 114 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 DDX11L8A8MPP1 907 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 LINC01565O15544 149 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 TBX10O75333 385 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
PDGFB-204ENST00000455790 XBP1P17861 261 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 NEK4P51957 841 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 NPEPPSP55786 919 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 PSMC5P62195 406 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 FAM189BP81408 668 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 DLX2Q07687 328 aaPredicted RBP13.41□□□□□ -0.26
PDGFB-204ENST00000455790 SPIRE1Q08AE8 756 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 CLUL1Q15846 466 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 ODR4Q5SWX8 454 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 PPP4R3AQ6IN85 833 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 ZNF579Q8NAF0 562 aaKnown RBP13.41□□□□□ -0.26
PDGFB-204ENST00000455790 POF1BQ8WVV4 589 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 NLRP7Q8WX94 980 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 TMEM161AQ9NX61 479 aa13.41□□□□□ -0.26
PDGFB-204ENST00000455790 PLXNA4Q9HCM2 1894 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 GRXCR2A6NFK2 248 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 ATF7P17544 494 aaPredicted RBP13.4□□□□□ -0.26
PDGFB-204ENST00000455790 KRT2P35908 639 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 CTC1Q2NKJ3 1217 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 LRRC55Q6ZSA7 311 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 ECHDC2Q86YB7 292 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 KSR1Q8IVT5 923 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 FAM20AQ96MK3 541 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 IGFLR1Q9H665 355 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 EPHX3Q9H6B9 360 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 CWH43Q9H720 699 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 ATP6V0A4Q9HBG4 840 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 BMP2KQ9NSY1 1161 aaPredicted RBP13.4□□□□□ -0.26
PDGFB-204ENST00000455790 TYW1Q9NV66 732 aaKnown RBP13.4□□□□□ -0.26
PDGFB-204ENST00000455790 RGL1Q9NZL6 768 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 RAPGEFL1Q9UHV5 662 aa13.4□□□□□ -0.26
PDGFB-204ENST00000455790 A0A087WZ62 844 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
PDGFB-204ENST00000455790 PBX3P40426 434 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 QARSP47897 775 aaKnown RBP13.39□□□□□ -0.27
PDGFB-204ENST00000455790 NAALADL2Q58DX5 795 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 CLLU1OSQ5K130 101 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 SPOUT1Q5T280 376 aaKnown RBP13.39□□□□□ -0.27
PDGFB-204ENST00000455790 NCAPH2Q6IBW4 605 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 FAM178BQ8IXR5 827 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 COLGALT1Q8NBJ5 622 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 WASF1Q92558 559 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 CASD1Q96PB1 797 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 FDXACB1Q9BRP7 624 aaPredicted RBP13.39□□□□□ -0.27
PDGFB-204ENST00000455790 LXNQ9BS40 222 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 ELAC1Q9H777 363 aaKnown RBP13.39□□□□□ -0.27
PDGFB-204ENST00000455790 CYP26B1Q9NR63 512 aa13.39□□□□□ -0.27
PDGFB-204ENST00000455790 SUCLA2Q9P2R7 463 aaPredicted RBP13.39□□□□□ -0.27
PDGFB-204ENST00000455790 ZBTB39O15060 712 aa13.38□□□□□ -0.27
PDGFB-204ENST00000455790 TBX3O15119 743 aa13.38□□□□□ -0.27
PDGFB-204ENST00000455790 FGF18O76093 207 aa13.38□□□□□ -0.27
PDGFB-204ENST00000455790 CYP4A11Q02928 519 aa13.38□□□□□ -0.27
PDGFB-204ENST00000455790 FAM43BQ6ZT52 329 aaPredicted RBP13.38□□□□□ -0.27
PDGFB-204ENST00000455790 ZNF598Q86UK7 904 aaKnown RBP13.38□□□□□ -0.27
PDGFB-204ENST00000455790 RHPN2Q8IUC4 686 aa13.38□□□□□ -0.27
PDGFB-204ENST00000455790 DIS3L2Q8IYB7 885 aaKnown RBP13.38□□□□□ -0.27
PDGFB-204ENST00000455790 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
PDGFB-204ENST00000455790 NLRP4Q96MN2 994 aa13.38□□□□□ -0.27
PDGFB-204ENST00000455790 GCOM2Q9BZD3 368 aaPredicted RBP13.38□□□□□ -0.27
PDGFB-204ENST00000455790 TMEM117Q9H0C3 514 aa13.38□□□□□ -0.27
PDGFB-204ENST00000455790 GLP2RO95838 553 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 P4HBP07237 508 aaKnown RBP13.37□□□□□ -0.27
PDGFB-204ENST00000455790 ZSCAN20P17040 1043 aaPredicted RBP13.37□□□□□ -0.27
PDGFB-204ENST00000455790 NRIP1P48552 1158 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
PDGFB-204ENST00000455790 GUCY1B3Q02153 619 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 CTTNQ14247 550 aaKnown RBP13.37□□□□□ -0.27
PDGFB-204ENST00000455790 EPHA7Q15375 998 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 RBM23Q86U06 439 aaKnown RBP13.37□□□□□ -0.27
PDGFB-204ENST00000455790 THNSL1Q8IYQ7 743 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 ZNF710Q8N1W2 664 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms