RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 KIAA1671Q9BY89 1806 aa19.39■□□□□ 0.69
USP39-208ENST00000455732 FNDC1Q4ZHG4 1894 aaPredicted RBP19.39■□□□□ 0.69
USP39-208ENST00000455732 MUC3AQ02505 3323 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 RFC5P40937 340 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 GPC3P51654 580 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 NPEPPSP55786 919 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 CCDC85BQ15834 202 aaPredicted RBP19.38■□□□□ 0.69
USP39-208ENST00000455732 TMEM266Q2M3C6 531 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 ODR4Q5SWX8 454 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 TPH2Q8IWU9 490 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 SLC7A3Q8WY07 619 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 CEP170P1Q96L14 293 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 OSMRQ99650 979 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 SH2D3AQ9BRG2 576 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 C17orf80Q9BSJ5 609 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 TSPYL2Q9H2G4 693 aaPredicted RBP19.38■□□□□ 0.69
USP39-208ENST00000455732 DHX33Q9H6R0 707 aaKnown RBP19.38■□□□□ 0.69
USP39-208ENST00000455732 ERVK-5Q9HDB9 667 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 TUFT1Q9NNX1 390 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 PRDM6Q9NQX0 595 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.38■□□□□ 0.69
USP39-208ENST00000455732 MTUS1Q9ULD2 1270 aa19.38■□□□□ 0.69
USP39-208ENST00000455732 ATG2AQ2TAZ0 1938 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 GTPBP6O43824 516 aaPredicted RBP19.37■□□□□ 0.69
USP39-208ENST00000455732 GAS2O43903 313 aaKnown RBP19.37■□□□□ 0.69
USP39-208ENST00000455732 RPS6KA5O75582 802 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 PRPHP41219 470 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 TECP42680 631 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 DNM2P50570 870 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 NLRP11P59045 1033 aaKnown RBP19.37■□□□□ 0.69
USP39-208ENST00000455732 PTGDRQ13258 359 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 DRP2Q13474 957 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 TJAP1Q5JTD0 557 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 BRAPQ7Z569 592 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 GDPD5Q8WTR4 605 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 ZNF689Q96CS4 500 aaPredicted RBP19.37■□□□□ 0.69
USP39-208ENST00000455732 PPP1R16BQ96T49 567 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 POLR3CQ9BUI4 534 aaPredicted RBP19.37■□□□□ 0.69
USP39-208ENST00000455732 ANKEF1Q9NU02 776 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 MYO7AQ13402 2215 aa19.37■□□□□ 0.69
USP39-208ENST00000455732 GPR182O15218 404 aa19.36■□□□□ 0.69
USP39-208ENST00000455732 SPATA31C1P0DKV0 1188 aa19.36■□□□□ 0.69
USP39-208ENST00000455732 XRCC6P12956 609 aaKnown RBP eCLIP19.36■□□□□ 0.69
USP39-208ENST00000455732 MUTP22033 750 aa19.36■□□□□ 0.69
USP39-208ENST00000455732 POLGP54098 1239 aaPredicted RBP19.36■□□□□ 0.69
USP39-208ENST00000455732 NFX1Q12986 1120 aaKnown RBP19.36■□□□□ 0.69
USP39-208ENST00000455732 FAM228AQ86W67 206 aa19.36■□□□□ 0.69
USP39-208ENST00000455732 ZNF579Q8NAF0 562 aaKnown RBP19.36■□□□□ 0.69
USP39-208ENST00000455732 ERMNQ8TAM6 284 aa19.36■□□□□ 0.69
USP39-208ENST00000455732 ZBTB39O15060 712 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 MGEA5O60502 916 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 DGKIO75912 1065 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 LINC00271P0C7V0 271 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 DARSP14868 501 aaKnown RBP19.35■□□□□ 0.69
USP39-208ENST00000455732 EIF4BP23588 611 aaKnown RBP19.35■□□□□ 0.69
USP39-208ENST00000455732 RPA1P27694 616 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 PDIA5Q14554 519 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 EPC2Q52LR7 807 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 XKR9Q5GH70 373 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 HAUS3Q68CZ6 603 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 ZNF410Q86VK4 478 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 CATSPER3Q86XQ3 398 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 MICALL1Q8N3F8 863 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 IGSF22Q8N9C0 903 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 SAMD11Q96NU1 681 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 LMCD1Q9NZU5 365 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 SUCLA2Q9P2R7 463 aaPredicted RBP19.35■□□□□ 0.69
USP39-208ENST00000455732 THEGQ9P2T0 379 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 ST3GAL5Q9UNP4 418 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 STK24Q9Y6E0 443 aa19.35■□□□□ 0.69
USP39-208ENST00000455732 ADGRA3Q8IWK6 1321 aa19.34■□□□□ 0.69
USP39-208ENST00000455732 MED24O75448 989 aa19.34■□□□□ 0.69
USP39-208ENST00000455732 RARRES1P49788 294 aa19.34■□□□□ 0.69
USP39-208ENST00000455732 ATP2C1P98194 919 aaPredicted RBP19.34■□□□□ 0.69
USP39-208ENST00000455732 EMC2Q15006 297 aa19.34■□□□□ 0.69
USP39-208ENST00000455732 NPAS4Q8IUM7 802 aa19.34■□□□□ 0.69
USP39-208ENST00000455732 FBXO22Q8NEZ5 403 aa19.34■□□□□ 0.69
USP39-208ENST00000455732 RAB34Q9BZG1 259 aa19.34■□□□□ 0.69
USP39-208ENST00000455732 NCOR1O75376 2440 aa19.33■□□□□ 0.69
USP39-208ENST00000455732 SYT1P21579 422 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 HSCBQ8IWL3 235 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 TMEM192Q8IY95 271 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 FIBCD1Q8N539 461 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 TCP11Q8WWU5 503 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 NLRP7Q8WX94 980 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 PSPC1Q8WXF1 523 aaKnown RBP19.33■□□□□ 0.68
USP39-208ENST00000455732 SCLT1Q96NL6 688 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 GCOM2Q9BZD3 368 aaPredicted RBP19.33■□□□□ 0.68
USP39-208ENST00000455732 RGS18Q9NS28 235 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 DBR1Q9UK59 544 aaKnown RBP19.33■□□□□ 0.68
USP39-208ENST00000455732 XIRP2A4UGR9 3374 aa19.33■□□□□ 0.68
USP39-208ENST00000455732 VPS37CA5D8V6 355 aaPredicted RBP19.32■□□□□ 0.68
USP39-208ENST00000455732 DGAT1O75907 488 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 SARSP49591 514 aaKnown RBP19.32■□□□□ 0.68
USP39-208ENST00000455732 DSC3Q14574 896 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 RHPN2Q8IUC4 686 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 PIGOQ8TEQ8 1089 aa19.32■□□□□ 0.68
USP39-208ENST00000455732 ATXN2LQ8WWM7 1075 aaKnown RBP19.32■□□□□ 0.68
USP39-208ENST00000455732 CLP1Q92989 425 aaKnown RBP19.32■□□□□ 0.68
USP39-208ENST00000455732 NACC1Q96RE7 527 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms