RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 CATSPER3Q86XQ3 398 aa17.28■□□□□ 0.36
VPS8-213ENST00000453056 RHPN2Q8IUC4 686 aa17.28■□□□□ 0.36
VPS8-213ENST00000453056 IGSF22Q8N9C0 903 aa17.28■□□□□ 0.36
VPS8-213ENST00000453056 SNX29Q8TEQ0 813 aa17.28■□□□□ 0.36
VPS8-213ENST00000453056 TMEM40Q8WWA1 233 aa17.28■□□□□ 0.36
VPS8-213ENST00000453056 YME1L1Q96TA2 773 aa17.28■□□□□ 0.36
VPS8-213ENST00000453056 TSPYL2Q9H2G4 693 aaPredicted RBP17.28■□□□□ 0.36
VPS8-213ENST00000453056 TTYH1Q9H313 450 aaPredicted RBP17.28■□□□□ 0.36
VPS8-213ENST00000453056 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
VPS8-213ENST00000453056 COL4A3BPQ9Y5P4 624 aa17.28■□□□□ 0.36
VPS8-213ENST00000453056 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.27■□□□□ 0.36
VPS8-213ENST00000453056 DENND3A2RUS2 1198 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 ARHGEF35A5YM69 484 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 DARSP14868 501 aaKnown RBP17.27■□□□□ 0.36
VPS8-213ENST00000453056 MYOGP15173 224 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 SFPQP23246 707 aaKnown RBP eCLIP17.27■□□□□ 0.36
VPS8-213ENST00000453056 RARRES1P49788 294 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 FAM228AQ86W67 206 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 PIGOQ8TEQ8 1089 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 NLRP4Q96MN2 994 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 INO80BQ9C086 356 aaPredicted RBP17.27■□□□□ 0.36
VPS8-213ENST00000453056 CDHR5Q9HBB8 845 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
VPS8-213ENST00000453056 ST3GAL5Q9UNP4 418 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 INSL6Q9Y581 213 aa17.27■□□□□ 0.36
VPS8-213ENST00000453056 MYH15Q9Y2K3 1946 aa17.27■□□□□ 0.35
VPS8-213ENST00000453056 CHD9Q3L8U1 2897 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 ZBTB39O15060 712 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 UPP2O95045 317 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 RESTQ13127 1097 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 TMCO2Q7Z6W1 182 aaPredicted RBP17.26■□□□□ 0.35
VPS8-213ENST00000453056 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
VPS8-213ENST00000453056 MCPH1Q8NEM0 835 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 TOP1MTQ969P6 601 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 TMEM143Q96AN5 459 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 ZNF668Q96K58 619 aaPredicted RBP17.26■□□□□ 0.35
VPS8-213ENST00000453056 ZSCAN16Q9H4T2 348 aaPredicted RBP17.26■□□□□ 0.35
VPS8-213ENST00000453056 C1orf112Q9NSG2 853 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 MTMR6Q9Y217 621 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 CDH23Q9H251 3354 aa17.26■□□□□ 0.35
VPS8-213ENST00000453056 VWA3AA6NCI4 1184 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 ENPP3O14638 875 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 ASAP2O43150 1006 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 USO1O60763 962 aaKnown RBP17.25■□□□□ 0.35
VPS8-213ENST00000453056 STAG3L1P0CL83 205 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 TFDP1Q14186 410 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 MXD4Q14582 209 aaPredicted RBP17.25■□□□□ 0.35
VPS8-213ENST00000453056 NPAS4Q8IUM7 802 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 LINC01599Q8WXQ3 324 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 GUCD1Q96NT3 240 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 TMX1Q9H3N1 280 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 CHD7Q9P2D1 2997 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 LRFN2Q9ULH4 789 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 COL4A6Q14031 1691 aa17.25■□□□□ 0.35
VPS8-213ENST00000453056 A0A087WZ62 844 aa17.24■□□□□ 0.35
VPS8-213ENST00000453056 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
VPS8-213ENST00000453056 PHKA2P46019 1235 aa17.24■□□□□ 0.35
VPS8-213ENST00000453056 HTRA4P83105 476 aaPredicted RBP17.24■□□□□ 0.35
VPS8-213ENST00000453056 LAMTOR4Q0VGL1 99 aa17.24■□□□□ 0.35
VPS8-213ENST00000453056 SF3A1Q15459 793 aaKnown RBP17.24■□□□□ 0.35
VPS8-213ENST00000453056 PRPF31Q8WWY3 499 aaKnown RBP17.24■□□□□ 0.35
VPS8-213ENST00000453056 CDK5RAP3Q96JB5 506 aa17.24■□□□□ 0.35
VPS8-213ENST00000453056 AK8Q96MA6 479 aa17.24■□□□□ 0.35
VPS8-213ENST00000453056 ADAM2Q99965 735 aa17.24■□□□□ 0.35
VPS8-213ENST00000453056 FDXACB1Q9BRP7 624 aaPredicted RBP17.24■□□□□ 0.35
VPS8-213ENST00000453056 DDX19AQ9NUU7 478 aaKnown RBP17.24■□□□□ 0.35
VPS8-213ENST00000453056 KIAA1024Q9UPX6 916 aa17.24■□□□□ 0.35
VPS8-213ENST00000453056 NLRC5Q86WI3 1866 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 SLC26A4O43511 780 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 FOSL2P15408 326 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 SARSP49591 514 aaKnown RBP17.23■□□□□ 0.35
VPS8-213ENST00000453056 TAP1Q03518 808 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 GRIN2CQ14957 1233 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 IL17AQ16552 155 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 SLC24A5Q71RS6 500 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 CATSPER4Q7RTX7 472 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 RNF149Q8NC42 400 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 GAS2L1Q99501 681 aaPredicted RBP17.23■□□□□ 0.35
VPS8-213ENST00000453056 CDX2Q99626 313 aaPredicted RBP17.23■□□□□ 0.35
VPS8-213ENST00000453056 POLR3FQ9H1D9 316 aaPredicted RBP17.23■□□□□ 0.35
VPS8-213ENST00000453056 XPNPEP1Q9NQW7 623 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 DNM3Q9UQ16 869 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 STXBP5LQ9Y2K9 1186 aa17.23■□□□□ 0.35
VPS8-213ENST00000453056 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 LCHNA4D1U4 455 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 PP2D1A8MPX8 630 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 RBAK-RBAKDNI3L0D1 243 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 SRGAP2CP0DJJ0 459 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 IBSPP21815 317 aaPredicted RBP17.22■□□□□ 0.35
VPS8-213ENST00000453056 BECN1Q14457 450 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 ZRSR1Q15695 479 aaKnown RBP17.22■□□□□ 0.35
VPS8-213ENST00000453056 PADI6Q6TGC4 694 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 KSR1Q8IVT5 923 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 KCTD17Q8N5Z5 321 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 SP7Q8TDD2 431 aaPredicted RBP17.22■□□□□ 0.35
VPS8-213ENST00000453056 TGS1Q96RS0 853 aaKnown RBP17.22■□□□□ 0.35
VPS8-213ENST00000453056 NT5C3AQ9H0P0 336 aa17.22■□□□□ 0.35
VPS8-213ENST00000453056 BHMT2Q9H2M3 363 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms