RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ADAMTS3O15072 1205 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 EOMESO95936 686 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
HERC3-207ENST00000452979 CDC27P30260 824 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 EFCAB12Q6NXP0 572 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 ZNF598Q86UK7 904 aaKnown RBP13.21□□□□□ -0.29
HERC3-207ENST00000452979 ECHDC2Q86YB7 292 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 CASP10Q92851 521 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 FAM167AQ96KS9 214 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 ADAM7Q9H2U9 754 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 GABBR1Q9UBS5 961 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 NR2E1Q9Y466 385 aa13.21□□□□□ -0.29
HERC3-207ENST00000452979 A0A0U1RQF3 1178 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 C2orf71A6NGG8 1288 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 TMOD1P28289 359 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 CIITAP33076 1130 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 ITIH3Q06033 890 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
HERC3-207ENST00000452979 TPRNQ4KMQ1 711 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 CLLU1OSQ5K130 101 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 LLGL2Q6P1M3 1020 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 TMC7Q7Z402 723 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 UBALD2Q8IYN6 164 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 ABI1Q8IZP0 508 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 SLC39A11Q8N1S5 342 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 NECTIN4Q96NY8 510 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 C6orf50Q9HD87 102 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 NRBP2Q9NSY0 501 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 PLXNA3P51805 1871 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 MYO15AQ9UKN7 3530 aa13.2□□□□□ -0.3
HERC3-207ENST00000452979 MYO10Q9HD67 2058 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 KLF18A0A0U1RQI7 1052 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 GOLGA8AA7E2F4 631 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 GOLGA8BA8MQT2 603 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 CLASP2O75122 1294 aaKnown RBP13.19□□□□□ -0.3
HERC3-207ENST00000452979 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
HERC3-207ENST00000452979 PBX3P40426 434 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 GPC3P51654 580 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 CLCN3P51790 818 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 REXO1Q8N1G1 1221 aaKnown RBP13.19□□□□□ -0.3
HERC3-207ENST00000452979 KREMEN2Q8NCW0 462 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 CCDC12Q8WUD4 166 aaPredicted RBP13.19□□□□□ -0.3
HERC3-207ENST00000452979 LENG9Q96B70 501 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 SNX27Q96L92 541 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 TRAIPQ9BWF2 469 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 APOL5Q9BWW9 433 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 SORCS3Q9UPU3 1222 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 AKT3Q9Y243 479 aa13.19□□□□□ -0.3
HERC3-207ENST00000452979 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 WDR64B1ANS9 1081 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
HERC3-207ENST00000452979 EDIL3O43854 480 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 ZNF862O60290 1169 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 GFRA3O60609 400 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 PDGFBP01127 241 aaPredicted RBP13.18□□□□□ -0.3
HERC3-207ENST00000452979 OATP04181 439 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
HERC3-207ENST00000452979 DARSP14868 501 aaKnown RBP13.18□□□□□ -0.3
HERC3-207ENST00000452979 GNA11P29992 359 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 CDC42EP1Q00587 391 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 PRR16Q569H4 304 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 TRMT1LQ7Z2T5 733 aaKnown RBP13.18□□□□□ -0.3
HERC3-207ENST00000452979 LRRC71Q8N4P6 559 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 RSPH1Q8WYR4 309 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 ATOH1Q92858 354 aaPredicted RBP13.18□□□□□ -0.3
HERC3-207ENST00000452979 MRPL9Q9BYD2 267 aaKnown RBP13.18□□□□□ -0.3
HERC3-207ENST00000452979 POMKQ9H5K3 350 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 CHST12Q9NRB3 414 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 FAM86C1Q9NVL1 165 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 DMDP11532 3685 aa13.18□□□□□ -0.3
HERC3-207ENST00000452979 ZDBF2Q9HCK1 2354 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 C2CD4DB7Z1M9 353 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
HERC3-207ENST00000452979 CXCL14O95715 111 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 MTHFRP42898 656 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 ALDH7A1P49419 539 aaKnown RBP13.17□□□□□ -0.3
HERC3-207ENST00000452979 USP11P51784 963 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 BCAR1P56945 870 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 KRT32Q14532 448 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
HERC3-207ENST00000452979 TARBP2Q15633 366 aaKnown RBP13.17□□□□□ -0.3
HERC3-207ENST00000452979 ZBTB33Q86T24 672 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 ZDHHC14Q8IZN3 488 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 RIT2Q99578 217 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 NIFKQ9BYG3 293 aaKnown RBP13.17□□□□□ -0.3
HERC3-207ENST00000452979 DISC1Q9NRI5 854 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 TCEAL9Q9UHQ7 104 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms