RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 STMN4Q9H169 189 aaPredicted RBP20.12■□□□□ 0.81
PTPA-223ENST00000452489 ARMT1Q9H993 441 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 ERVK-5Q9HDB9 667 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 CHMP2BQ9UQN3 213 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 GMEB1Q9Y692 573 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 SLC4A7Q9Y6M7 1214 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 MARF1Q9Y4F3 1742 aaKnown RBP20.12■□□□□ 0.81
PTPA-223ENST00000452489 RGPD2P0DJD1 1756 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 KRT36O76013 467 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 FUT4P22083 530 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 P3H1Q32P28 736 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 CENPPQ6IPU0 288 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 KBTBD2Q8IY47 623 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 TPCN2Q8NHX9 752 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 INPP5DQ92835 1189 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 HIC2Q96JB3 615 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 TMEM60Q9H2L4 133 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 DHX36Q9H2U1 1008 aaKnown RBP20.11■□□□□ 0.81
PTPA-223ENST00000452489 HSFX1Q9UBD0 423 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.11■□□□□ 0.81
PTPA-223ENST00000452489 PLCG1P19174 1290 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 NLRP5P59047 1200 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 ALX1Q15699 326 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 DTHD1Q6ZMT9 781 aa20.11■□□□□ 0.81
PTPA-223ENST00000452489 CNOT7Q9UIV1 285 aaKnown RBP20.11■□□□□ 0.81
PTPA-223ENST00000452489 TCRBV5S4A2TA0A5A2 114 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 RIPK2O43353 540 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 ECE2O60344 883 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 LYNP07948 512 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 ADCY1Q08828 1119 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 SETDB1Q15047 1291 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 MTFR1Q15390 333 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 LRRC74BQ6ZQY2 392 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 ARHGAP18Q8N392 663 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 EDEM3Q9BZQ6 932 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 KANSL2Q9H9L4 492 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 TNKSO95271 1327 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 KIAA0391O15091 583 aaKnown RBP20.1■□□□□ 0.81
PTPA-223ENST00000452489 RXRBP28702 533 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 POLGP54098 1239 aaPredicted RBP20.1■□□□□ 0.81
PTPA-223ENST00000452489 PRPF4BQ13523 1007 aaKnown RBP20.1■□□□□ 0.81
PTPA-223ENST00000452489 ACVR2BQ13705 512 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 BTNL9Q6UXG8 535 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 TMTC2Q8N394 836 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 TUBGCP5Q96RT8 1024 aa20.1■□□□□ 0.81
PTPA-223ENST00000452489 ATP5HO75947 161 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 TMCC1O94876 653 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 TRAPPC10P48553 1259 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 PTENP60484 403 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 DDB1Q16531 1140 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 DSTYKQ6XUX3 929 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 DTX3LQ8TDB6 740 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 FBXO41Q8TF61 875 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 SYN2Q92777 582 aaPredicted RBP20.09■□□□□ 0.81
PTPA-223ENST00000452489 TMEM109Q9BVC6 243 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 GRHL1Q9NZI5 618 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 ARFGEF2Q9Y6D5 1785 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 SMIM22K7EJ46 135 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 CAPN9O14815 690 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 NEK3P51956 506 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 PABPC4Q13310 644 aaKnown RBP eCLIP20.09■□□□□ 0.813e-7■■■□□ 17.6
PTPA-223ENST00000452489 LIN52Q52LA3 116 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 KIAA1755Q5JYT7 1200 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 JAMLQ86YT9 394 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 PLBD2Q8NHP8 589 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 RASGRP4Q8TDF6 673 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 SH3TC2Q8TF17 1288 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 ESR2Q92731 530 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 LRRC37BQ96QE4 947 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 STXBP5LQ9Y2K9 1186 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 COMMD3-BMI1R4GMX3 469 aa20.09■□□□□ 0.81
PTPA-223ENST00000452489 RGPD8O14715 1765 aaPredicted RBP20.08■□□□□ 0.81
PTPA-223ENST00000452489 NFAT5O94916 1531 aa20.08■□□□□ 0.81
PTPA-223ENST00000452489 GSG1L2A8MUP6 293 aa20.08■□□□□ 0.81
PTPA-223ENST00000452489 LMNAP02545 664 aaKnown RBP20.08■□□□□ 0.81
PTPA-223ENST00000452489 STX2P32856 288 aa20.08■□□□□ 0.81
PTPA-223ENST00000452489 PTK2Q05397 1052 aa20.08■□□□□ 0.81
PTPA-223ENST00000452489 C4orf50Q6ZRC1 276 aa20.08■□□□□ 0.81
PTPA-223ENST00000452489 TOM1L2Q6ZVM7 507 aa20.08■□□□□ 0.81
PTPA-223ENST00000452489 DDX27Q96GQ7 796 aaKnown RBP20.08■□□□□ 0.81
PTPA-223ENST00000452489 AIPL1Q9NZN9 384 aa20.08■□□□□ 0.81
PTPA-223ENST00000452489 PFASO15067 1338 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 A6NJR5 290 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 BTNL10A8MVZ5 291 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 TBX10O75333 385 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 RCAN1P53805 252 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 TNIP1Q15025 636 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 SEC23AQ15436 765 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 WDR72Q3MJ13 1102 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 MFSD5Q6N075 450 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 DYDC2Q96IM9 177 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 PITPNM3Q9BZ71 974 aa20.08■□□□□ 0.8
PTPA-223ENST00000452489 IQCGQ9H095 443 aaKnown RBP20.08■□□□□ 0.8
PTPA-223ENST00000452489 BAZ2BQ9UIF8 2168 aaKnown RBP20.08■□□□□ 0.8
PTPA-223ENST00000452489 FAM205AQ6ZU69 1335 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 ASLP04424 464 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 FOXN2P32314 431 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 ASIC2Q16515 512 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 OLFML2BQ68BL8 750 aa20.07■□□□□ 0.8
PTPA-223ENST00000452489 LRRC55Q6ZSA7 311 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms