RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
LINC00339-205ENST00000452322 SLFN14P0C7P3 912 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 SELPP16109 830 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 ARL2P36404 184 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 MRPS6P82932 125 aaKnown RBP13.2□□□□□ -0.3
LINC00339-205ENST00000452322 CDC42EP1Q00587 391 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 DHX8Q14562 1220 aaKnown RBP13.2□□□□□ -0.3
LINC00339-205ENST00000452322 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 FAM26DQ5JW98 314 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 FAM102BQ5T8I3 360 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 ENGASEQ8NFI3 743 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 KIFAP3Q92845 792 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 TRIM43Q96BQ3 446 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-205ENST00000452322 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 LRRC27Q9C0I9 530 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 NR2E3Q9Y5X4 410 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 UMODL1Q5DID0 1318 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 M0QZ92 97 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 ASAP2O43150 1006 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 ZNF202O95125 648 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 TIMP1P01033 207 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 VTNP04004 478 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 RAG1P15918 1043 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 AMPD3Q01432 767 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 MGAT3Q09327 533 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 SNW1Q13573 536 aaKnown RBP13.19□□□□□ -0.3
LINC00339-205ENST00000452322 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
LINC00339-205ENST00000452322 LONRF3Q496Y0 759 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 ZNF618Q5T7W0 954 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 TRAF7Q6Q0C0 670 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 LRRC8DQ7L1W4 858 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 MAEAQ7L5Y9 396 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 FMR1NBQ8N0W7 255 aaPredicted RBP13.19□□□□□ -0.3
LINC00339-205ENST00000452322 PRPF31Q8WWY3 499 aaKnown RBP13.19□□□□□ -0.3
LINC00339-205ENST00000452322 DRC1Q96MC2 740 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 POLR3FQ9H1D9 316 aaPredicted RBP13.19□□□□□ -0.3
LINC00339-205ENST00000452322 WNT8AQ9H1J5 351 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 GPRC5CQ9NQ84 441 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 LMBRD1Q9NUN5 540 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 SERTAD1Q9UHV2 236 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 TRPV2Q9Y5S1 764 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 CDY2AQ9Y6F7 541 aa13.19□□□□□ -0.3
LINC00339-205ENST00000452322 TNRC18O15417 2968 aaPredicted RBP13.18□□□□□ -0.3
LINC00339-205ENST00000452322 LTBP2Q14767 1821 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 MYMKA6NI61 221 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 RSPH10B2B2RC85 870 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 HIP1RO75146 1068 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 GPR32O75388 356 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 PARNO95453 639 aaKnown RBP13.18□□□□□ -0.3
LINC00339-205ENST00000452322 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
LINC00339-205ENST00000452322 CTSHP09668 335 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 IQCF3P0C7M6 154 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 RSPH10BP0C881 870 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 ITGB8P26012 769 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 CYP2C18P33260 490 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 GPC3P51654 580 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 TMEM62Q0P6H9 643 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 LAMTOR4Q0VGL1 99 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 MAPK7Q13164 816 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 MFSD5Q6N075 450 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 KRBA2Q6ZNG9 492 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 ZNF410Q86VK4 478 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 RHPN2Q8IUC4 686 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 DAW1Q8N136 415 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 CNNM3Q8NE01 707 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 DDX12PQ92771 950 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 CELF4Q9BZC1 486 aaKnown RBP13.18□□□□□ -0.3
LINC00339-205ENST00000452322 C17orf75Q9HAS0 396 aa13.18□□□□□ -0.3
LINC00339-205ENST00000452322 SIP14410 1827 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 NR1I2O75469 434 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 CHRNA1P02708 482 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 MYL1P05976 194 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 LIG1P18858 919 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 GLRA2P23416 452 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 RFC2P35250 354 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 ZNF131P52739 623 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
LINC00339-205ENST00000452322 CCL23P55773 120 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 NLRP11P59045 1033 aaKnown RBP13.17□□□□□ -0.3
LINC00339-205ENST00000452322 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 RAD51AP2Q09MP3 1159 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 CAPSQ13938 189 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 GIT2Q14161 759 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 TFDP1Q14186 410 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 PPP2R5AQ15172 486 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 KIZQ2M2Z5 673 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 KANK3Q6NY19 840 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 CNNM4Q6P4Q7 775 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 STAMQ92783 540 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 DNAJC19Q96DA6 116 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
LINC00339-205ENST00000452322 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms