RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 FGFR1P11362 822 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 IBSPP21815 317 aaPredicted RBP12.31□□□□□ -0.44
USP1-204ENST00000452143 SFNP31947 248 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 HSPA4P34932 840 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 CLCN3P51790 818 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 PLCB3Q01970 1234 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 AKAP17AQ02040 695 aaKnown RBP12.31□□□□□ -0.44
USP1-204ENST00000452143 BLOC1S2Q6QNY1 142 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 Q6ZUG5 572 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 RASGRP4Q8TDF6 673 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 MICAL1Q8TDZ2 1067 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 RSPH1Q8WYR4 309 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 JAKMIP1Q96N16 626 aaKnown RBP12.31□□□□□ -0.44
USP1-204ENST00000452143 RIT2Q99578 217 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 PHF7Q9BWX1 381 aaPredicted RBP12.31□□□□□ -0.44
USP1-204ENST00000452143 CWH43Q9H720 699 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 TYW1Q9NV66 732 aaKnown RBP12.31□□□□□ -0.44
USP1-204ENST00000452143 AKT3Q9Y243 479 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 PCDHGC5Q9Y5F6 944 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 CACNA1HO95180 2353 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 ZSCAN20P17040 1043 aaPredicted RBP12.3□□□□□ -0.44
USP1-204ENST00000452143 IFNAR1P17181 557 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 EIF4BP23588 611 aaKnown RBP12.3□□□□□ -0.44
USP1-204ENST00000452143 USP11P51784 963 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 JAK3P52333 1124 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 NLRP11P59045 1033 aaKnown RBP12.3□□□□□ -0.44
USP1-204ENST00000452143 PRKCEQ02156 737 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 NHLH1Q02575 133 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 NTRK3Q16288 839 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 EFCAB12Q6NXP0 572 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 TMEM184AQ6ZMB5 413 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 BMP8AQ7Z5Y6 402 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 ABI1Q8IZP0 508 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 SUSD6Q92537 303 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 MRPS27Q92552 414 aaKnown RBP12.3□□□□□ -0.44
USP1-204ENST00000452143 PHKBQ93100 1093 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 FBXL18Q96ME1 805 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 PPP1R16BQ96T49 567 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 C22orf23Q9BZE7 217 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 ADAMTS10Q9H324 1103 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 NGRNQ9NPE2 291 aaKnown RBP12.3□□□□□ -0.44
USP1-204ENST00000452143 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 DISC1Q9NRI5 854 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 HCSTQ9UBK5 93 aa12.3□□□□□ -0.44
USP1-204ENST00000452143 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
USP1-204ENST00000452143 MSH4O15457 936 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 ZNF862O60290 1169 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 GAS7O60861 476 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 CPA1P15085 419 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 RPS6KB1P23443 525 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 GPC3P51654 580 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 ERVFC1P60507 584 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 TBC1D8BQ0IIM8 1120 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 KCNC3Q14003 757 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 TRIM67Q6ZTA4 783 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 VN1R2Q8NFZ6 395 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 RDM1Q8NG50 284 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 ZNF558Q96NG5 402 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 CASD1Q96PB1 797 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 TCF25Q9BQ70 676 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 MRPL9Q9BYD2 267 aaKnown RBP12.29□□□□□ -0.44
USP1-204ENST00000452143 ENTPD7Q9NQZ7 604 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 NRBP2Q9NSY0 501 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 DACT1Q9NYF0 836 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 SNX14Q9Y5W7 946 aa12.29□□□□□ -0.44
USP1-204ENST00000452143 CARNS1A5YM72 827 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 PER2O15055 1255 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 ADAMTS3O15072 1205 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
USP1-204ENST00000452143 HOXB8P17481 243 aaPredicted RBP12.28□□□□□ -0.44
USP1-204ENST00000452143 PSMA5P28066 241 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 EVCP57679 992 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 ZXDAP98168 799 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 CDC42EP1Q00587 391 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 KRT17Q04695 432 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 LRCH2Q5VUJ6 765 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 PLPP4Q5VZY2 271 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 KCNT2Q6UVM3 1135 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 TRMT1LQ7Z2T5 733 aaKnown RBP12.28□□□□□ -0.44
USP1-204ENST00000452143 ALYREFQ86V81 257 aaKnown RBP12.28□□□□□ -0.44
USP1-204ENST00000452143 SKAP1Q86WV1 359 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 ECHDC2Q86YB7 292 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 FAM177A1Q8N128 213 aaPredicted RBP12.28□□□□□ -0.44
USP1-204ENST00000452143 LRRC71Q8N4P6 559 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 SLC5A5Q92911 643 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 CCDC136Q96JN2 1154 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 SCLT1Q96NL6 688 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 PRRX2Q99811 253 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 TEKT3Q9BXF9 490 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 SLC26A6Q9BXS9 759 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 RNF19AQ9NV58 838 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 VPS54Q9P1Q0 977 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 USP34Q70CQ2 3546 aa12.28□□□□□ -0.44
USP1-204ENST00000452143 A0A0U1RQF3 1178 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 TMEM221A6NGB7 291 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 M0R296 226 aa12.27□□□□□ -0.45
USP1-204ENST00000452143 REC8O95072 547 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms